RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 DPH7Q9BTV6 452 aa16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 ZNF552Q9H707 407 aaPredicted RBP16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 MRPS30Q9NP92 439 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 ZC3H7BQ9UGR2 993 aaKnown RBP16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 SHANK1Q9Y566 2161 aa16.82■□□□□ 0.28
PDLIM2-208ENST00000416159 HEATR5BQ9P2D3 2071 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 LOC105369274A0A096LPK9 316 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 LOC102723532A0A0G2JNH3 316 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 PHF2O75151 1096 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 MPC1LP0DKB6 136 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 GNLYP22749 145 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 RPA3P35244 121 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 MAGEA3P43357 314 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 OR1D4P47884 311 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 AIMP2Q13155 320 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 CTBP1Q13363 440 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 LONRF1Q17RB8 773 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 MUM1Q2TAK8 710 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 PRMT9Q6P2P2 845 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 IGFL3Q6UXB1 125 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 TMEM151BQ8IW70 566 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 DENND6AQ8IWF6 608 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 REXO1L1PQ8IX06 675 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 OR4N4Q8N0Y3 316 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 NAT8LQ8N9F0 302 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 FBXO15Q8NCQ5 510 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 ACTRT1Q8TDG2 376 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 TM9SF4Q92544 642 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 KCNJ9Q92806 393 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 SIGLEC10Q96LC7 697 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 PKP4Q99569 1192 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 ACAT2Q9BWD1 397 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 ZNF304Q9HCX3 659 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 FBXO6Q9NRD1 293 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 SEMA3GQ9NS98 782 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 C20orf96Q9NUD7 363 aaPredicted RBP16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 UTP6Q9NYH9 597 aaKnown RBP16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 CDC23Q9UJX2 597 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 DHRS7Q9Y394 339 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 MAD1L1Q9Y6D9 718 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 COMMD10Q9Y6G5 202 aa16.81■□□□□ 0.28
PDLIM2-208ENST00000416159 GOLGA6L10A0A0M3HER8 536 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 VSTM2BA6NLU5 285 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 KIF5CO60282 957 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 VPS26AO75436 327 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 CCNDBP1O95273 360 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 EIF2S1P05198 315 aaKnown RBP16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 ERVK-10P10266 1014 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 ENO3P13929 434 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 ITGA3P26006 1051 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 UQCRFS1P47985 274 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 FNTAP49354 379 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 PNLIPRP1P54315 467 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 EMP3P54852 163 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 OCA2Q04671 838 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 FHL5Q5TD97 284 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 SUSD1Q6UWL2 747 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 PPIL6Q8IXY8 311 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 SLC35F6Q8N357 371 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 ZADH2Q8N4Q0 377 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 INPP5DQ92835 1189 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 COL26A1Q96A83 441 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 OSBPL9Q96SU4 736 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 SLC30A3Q99726 388 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 PLCD4Q9BRC7 762 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 SLC29A3Q9BZD2 475 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 SOX17Q9H6I2 414 aaPredicted RBP16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 SLC6A20Q9NP91 592 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 LUZP4Q9P127 313 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 FBXL4Q9UKA2 621 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 MAU2Q9Y6X3 613 aa16.8■□□□□ 0.28
PDLIM2-208ENST00000416159 DOCK10Q96BY6 2186 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 CYSRT1A8MQ03 144 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 H0YGG7 62 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 MASP2O00187 686 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 SOCS6O14544 535 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 ZSCAN12O43309 604 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 ZBTB14O43829 449 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 SLC1A2P43004 574 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 CARSP49589 748 aaKnown RBP16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 ARF3P61204 181 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 YBX1P67809 324 aaKnown RBP16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 ABATP80404 500 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 PRDX1Q06830 199 aaKnown RBP16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 TSTA3Q13630 321 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 RBBP7Q16576 425 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 PRTGQ2VWP7 1150 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 PLEKHN1Q494U1 663 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 PRAMEF13Q5VWM6 474 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 ZNF549Q6P9A3 640 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 PAQR7Q86WK9 346 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 IQCKQ8N0W5 287 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 METTL27Q8N6F8 245 aaPredicted RBP16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 COG1Q8WTW3 980 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 ASB11Q8WXH4 323 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 CTSFQ9UBX1 484 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 TAC3Q9UHF0 121 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 FBXO5Q9UKT4 447 aa16.79■□□□□ 0.28
PDLIM2-208ENST00000416159 CDC14AQ9UNH5 594 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms