RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 ZNF678Q5SXM1 525 aa11.07□□□□□ -0.64
SNX13-202ENST00000409604 SYVN1Q86TM6 617 aa11.07□□□□□ -0.64
SNX13-202ENST00000409604 OR13H1Q8NG92 308 aa11.07□□□□□ -0.64
SNX13-202ENST00000409604 ELSPBP1Q96BH3 223 aa11.07□□□□□ -0.64
SNX13-202ENST00000409604 C7orf26Q96N11 449 aa11.07□□□□□ -0.64
SNX13-202ENST00000409604 QRFPRQ96P65 431 aa11.07□□□□□ -0.64
SNX13-202ENST00000409604 SORBS1Q9BX66 1292 aaKnown RBP11.07□□□□□ -0.64
SNX13-202ENST00000409604 GRIP2Q9C0E4 1043 aa11.07□□□□□ -0.64
SNX13-202ENST00000409604 VPS29Q9UBQ0 182 aa11.07□□□□□ -0.64
SNX13-202ENST00000409604 PTPRFP10586 1907 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 PARP14Q460N5 1801 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 PRAMEF33A0A0G2JMD5 474 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.06□□□□□ -0.64
SNX13-202ENST00000409604 ITPKBP27987 946 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 MAZP56270 477 aaKnown RBP11.06□□□□□ -0.64
SNX13-202ENST00000409604 TAS2R50P59544 299 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 RPS14P62263 151 aaKnown RBP11.06□□□□□ -0.64
SNX13-202ENST00000409604 SH3BP2P78314 561 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 DOC2AQ14183 400 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 UNC50Q53HI1 259 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 IYDQ6PHW0 289 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 SPPL2CQ8IUH8 684 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 MRGPRX1Q96LB2 322 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 TMEM74Q96NL1 305 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 FAM83CQ9BQN1 747 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 CPEB1Q9BZB8 566 aaKnown RBP11.06□□□□□ -0.64
SNX13-202ENST00000409604 CD244Q9BZW8 370 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 VCX3AQ9NNX9 186 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 IL37Q9NZH6 218 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 LEF1Q9UJU2 399 aaPredicted RBP11.06□□□□□ -0.64
SNX13-202ENST00000409604 TCEA3O75764 348 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 ATP6V1C1P21283 382 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 GCAP28676 217 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 CD6P30203 668 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 MLLT3P42568 568 aaPredicted RBP11.06□□□□□ -0.64
SNX13-202ENST00000409604 KCNC1P48547 511 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 CORO7P57737 925 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 Q6ZNB5 142 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 RINLQ6ZS11 566 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 CPSF7Q8N684 471 aaKnown RBP11.06□□□□□ -0.64
SNX13-202ENST00000409604 OR2T34Q8NGX1 318 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 OR52J3Q8NH60 311 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 ITM2CQ9NQX7 267 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 ANGPT4Q9Y264 503 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 SCN5AQ14524 2016 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 URADA6NGE7 173 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 FADS2P1A8MWK0 482 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 E7EQ34 232 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 SLC28A2O43868 658 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 APBB3O95704 486 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 OPN1SWP03999 348 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 ZCCHC18P0CG32 403 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 HOXC13P31276 330 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 SRP54P61011 504 aaKnown RBP11.06□□□□□ -0.64
SNX13-202ENST00000409604 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.06□□□□□ -0.64
SNX13-202ENST00000409604 KRTCAP2Q8N6L1 136 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 TTC29Q8NA56 475 aaPredicted RBP11.06□□□□□ -0.64
SNX13-202ENST00000409604 SLC5A11Q8WWX8 675 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 PKP4Q99569 1192 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 PNO1Q9NRX1 252 aaKnown RBP11.06□□□□□ -0.64
SNX13-202ENST00000409604 ATAD3AQ9NVI7 634 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 SORCS3Q9UPU3 1222 aa11.06□□□□□ -0.64
SNX13-202ENST00000409604 BTN3A3O00478 584 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 DNAJA2O60884 412 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 UMPSP11172 480 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 PNLIPRP1P54315 467 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 SMAD4Q13485 552 aaKnown RBP11.05□□□□□ -0.64
SNX13-202ENST00000409604 CYP27C1Q4G0S4 372 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 SLC2A7Q6PXP3 512 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 ADCY4Q8NFM4 1077 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 OR2I1PQ8NGU4 316 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 ZNF556Q9HAH1 456 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 FGF22Q9HCT0 170 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 FSCN3Q9NQT6 498 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 FADS3Q9Y5Q0 445 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 ARHGEF33A8MVX0 844 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 TRAFD1O14545 582 aaPredicted RBP11.05□□□□□ -0.64
SNX13-202ENST00000409604 MBTPS2O43462 519 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 MOSPD3O75425 235 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 AP1S2P56377 157 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 PRKCQQ04759 706 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 ABRAXAS2Q15018 415 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 ELOCQ15369 112 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 SPANXN4Q5MJ08 99 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 STEAP4Q687X5 459 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 AMIGO1Q86WK6 493 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 TCAIMQ8N3R3 496 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 SFRP1Q8N474 314 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 TEX26Q8N6G2 289 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 ZNF740Q8NDX6 193 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 MAPK15Q8TD08 544 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 GLMNQ92990 594 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 ISG20Q96AZ6 181 aaKnown RBP11.05□□□□□ -0.64
SNX13-202ENST00000409604 SAR1AQ9NR31 198 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 ALKBH4Q9NXW9 302 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 COPG1Q9Y678 874 aaKnown RBP11.05□□□□□ -0.64
SNX13-202ENST00000409604 LAMA3Q16787 3333 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 B3GALT4O96024 378 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 FDXRP22570 491 aa11.05□□□□□ -0.64
SNX13-202ENST00000409604 TOR1AIP1Q5JTV8 583 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms