RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CDKL1Q00532 357 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 NAE1Q13564 534 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 MAP7Q14244 749 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 SLC29A2Q14542 456 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 THEMIS2Q5TEJ8 643 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 TAOK1Q7L7X3 1001 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 TIPARPQ7Z3E1 657 aaKnown RBP19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 TBC1D1Q86TI0 1168 aaPredicted RBP19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 TMEM126BQ8IUX1 230 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 SGPP1Q9BX95 441 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 UNKQ9C0B0 810 aaKnown RBP19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 ATG10Q9H0Y0 220 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 EPB41L4BQ9H329 900 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 SNX15Q9NRS6 342 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 ACOT9Q9Y305 439 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 OARD1Q9Y530 152 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 PCDHB3Q9Y5E6 796 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 ANKRD12Q6UB98 2062 aa19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 KMT2BQ9UMN6 2715 aaPredicted RBP19.07■□□□□ 0.64
PDLIM2-207ENST00000409417 SEC16AO15027 2179 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 OR2A25A4D2G3 310 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 RAD1O60671 282 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 SCRG1O75711 98 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 ALDOAP04075 364 aaKnown RBP19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 CNTFP26441 200 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 SERPINB8P50452 374 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 CSHL1Q14406 222 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 ZXDCQ2QGD7 858 aaPredicted RBP19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 DEFB110Q30KQ9 67 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 ZC3H12BQ5HYM0 836 aaKnown RBP19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 CAPN13Q6MZZ7 669 aaPredicted RBP19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 C6orf15Q6UXA7 325 aaPredicted RBP19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 FRA10AC1Q70Z53 315 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 MCATQ8IVS2 390 aaKnown RBP19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 GPR135Q8IZ08 494 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 CACNA2D3Q8IZS8 1091 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 ESX1Q8N693 406 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 DCAKDQ8WVC6 231 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 MED8Q96G25 268 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 DHRS4Q9BTZ2 278 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 SLC6A20Q9NP91 592 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 ABCF3Q9NUQ8 709 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 EURLQ9NYK6 297 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 ANKMY1Q9P2S6 941 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 TLK1Q9UKI8 766 aa19.06■□□□□ 0.64
PDLIM2-207ENST00000409417 PCM1Q15154 2024 aa19.05■□□□□ 0.64
PDLIM2-207ENST00000409417 IGKV1-8A0A0C4DH67 115 aa19.05■□□□□ 0.64
PDLIM2-207ENST00000409417 CTSVO60911 334 aa19.05■□□□□ 0.64
PDLIM2-207ENST00000409417 CPNE3O75131 537 aaKnown RBP19.05■□□□□ 0.64
PDLIM2-207ENST00000409417 OR2B3O76000 313 aa19.05■□□□□ 0.64
PDLIM2-207ENST00000409417 C2P06681 752 aa19.05■□□□□ 0.64
PDLIM2-207ENST00000409417 TYK2P29597 1187 aa19.05■□□□□ 0.64
PDLIM2-207ENST00000409417 BROXQ5VW32 411 aa19.05■□□□□ 0.64
PDLIM2-207ENST00000409417 PRAMEF13Q5VWM6 474 aa19.05■□□□□ 0.64
PDLIM2-207ENST00000409417 IL22RA1Q8N6P7 574 aa19.05■□□□□ 0.64
PDLIM2-207ENST00000409417 GALNT6Q8NCL4 622 aa19.05■□□□□ 0.64
PDLIM2-207ENST00000409417 OR56A3Q8NH54 315 aa19.05■□□□□ 0.64
PDLIM2-207ENST00000409417 HNRNPLLQ8WVV9 542 aaKnown RBP19.05■□□□□ 0.64
PDLIM2-207ENST00000409417 KIAA1191Q96A73 305 aa19.05■□□□□ 0.64
PDLIM2-207ENST00000409417 CCNL2Q96S94 520 aaPredicted RBP19.05■□□□□ 0.64
PDLIM2-207ENST00000409417 PLCD4Q9BRC7 762 aa19.05■□□□□ 0.64
PDLIM2-207ENST00000409417 NMRAL1Q9HBL8 299 aa19.05■□□□□ 0.64
PDLIM2-207ENST00000409417 SNX7Q9UNH6 387 aa19.05■□□□□ 0.64
PDLIM2-207ENST00000409417 A0A087X1B8 175 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 TEX51A0A1B0GUA7 166 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 E7EQ34 232 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 H3BMH7 237 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 MT-ND3P03897 115 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 NTRK1P04629 796 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 ANXA5P08758 320 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 LTA4HP09960 611 aaKnown RBP19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 HRH2P25021 359 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 GMPRP36959 345 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 HNMTP50135 292 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 UCNP55089 124 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 VSNL1P62760 191 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 TGFBIQ15582 683 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 TAF1BQ53T94 588 aaPredicted RBP19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 PRAMEF17Q5VTA0 474 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 ZNF425Q6IV72 752 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 WDR93Q6P2C0 686 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 GPSM1Q86YR5 675 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 ISL2Q96A47 359 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 PTERQ96BW5 349 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 RNF31Q96EP0 1072 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 SPRTNQ9H040 489 aaPredicted RBP19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 IGSF5Q9NSI5 407 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 WDR70Q9NW82 654 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 FETUBQ9UGM5 382 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 AP1M2Q9Y6Q5 423 aa19.04■□□□□ 0.64
PDLIM2-207ENST00000409417 A0A096LPK6 155 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 NRP2O60462 931 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 KRT37O76014 449 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 NPPBP16860 134 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 GCAP28676 217 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 RELAQ04206 551 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 ABHD18Q0P651 414 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 DLG1Q12959 904 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 OR4D1Q15615 310 aa19.03■□□□□ 0.64
PDLIM2-207ENST00000409417 FAM83EQ2M2I3 478 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms