RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 IQCHQ86VS3 1027 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 AMIGO1Q86WK6 493 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 C17orf64Q86WR6 236 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 LRRC56Q8IYG6 542 aaPredicted RBP3.58□□□□□ -1.84
RTN4-208ENST00000404909 MAML2Q8IZL2 1156 aaPredicted RBP3.58□□□□□ -1.84
RTN4-208ENST00000404909 SFRP1Q8N474 314 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 KIF2BQ8N4N8 673 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 ZNF740Q8NDX6 193 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 C1orf216Q8TAB5 229 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 FAM174AQ8TBP5 190 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 ZDHHC1Q8WTX9 485 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 PIGKQ92643 395 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SLC45A3Q96JT2 553 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 PRAP1Q96NZ9 151 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 FRG2BQ96QU4 278 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 CCDC28BQ9BUN5 200 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 CCDC106Q9BWC9 280 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SGPP1Q9BX95 441 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SRMSQ9H3Y6 488 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 PRMT8Q9NR22 394 aaPredicted RBP3.58□□□□□ -1.84
RTN4-208ENST00000404909 GPR27Q9NS67 375 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 TXLNGQ9NUQ3 528 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 TMEM74BQ9NUR3 256 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 CUEDC1Q9NWM3 386 aaPredicted RBP3.58□□□□□ -1.84
RTN4-208ENST00000404909 CPNE7Q9UBL6 633 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 TRPS1Q9UHF7 1281 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 ICKQ9UPZ9 632 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 ASXL3Q9C0F0 2248 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 PCM1Q15154 2024 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 CCDC163A0A0D9SF12 145 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 GSAPA4D1B5 854 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 CAPN14A8MX76 684 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 ISM1B1AKI9 464 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 RGS14O43566 566 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 HRO43593 1189 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 KDM1AO60341 852 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SEC22BO75396 215 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 UNC5CO95185 931 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 ALDOCP09972 364 aaKnown RBP3.58□□□□□ -1.84
RTN4-208ENST00000404909 T-ENOLP0DO92 83 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 NME1P15531 152 aaKnown RBP3.58□□□□□ -1.84
RTN4-208ENST00000404909 GNSP15586 552 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 CCND1P24385 295 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 NDUFS1P28331 727 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 HSD17B2P37059 387 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 NXPH1P58417 271 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 STX1BP61266 288 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 RPL38P63173 70 aaKnown RBP3.58□□□□□ -1.84
RTN4-208ENST00000404909 MXRA7P84157 204 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 GPR18Q14330 331 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 RBBP5Q15291 538 aaKnown RBP3.58□□□□□ -1.84
RTN4-208ENST00000404909 CYP2A13Q16696 494 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 C6orf136Q5SQH8 315 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 LIPJQ5W064 366 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 WASH2PQ6VEQ5 465 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SLCO4C1Q6ZQN7 724 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 PRR23BQ6ZRT6 265 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 YTHDF3Q7Z739 585 aaKnown RBP3.58□□□□□ -1.84
RTN4-208ENST00000404909 PLD3Q8IV08 490 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 NAGSQ8N159 534 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 L3MBTL4Q8NA19 623 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 DTWD2Q8NBA8 298 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 OR9I1Q8NGQ6 314 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SLC37A2Q8TED4 501 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 DNASE2BQ8WZ79 361 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 NSL1Q96IY1 281 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 HAUS8Q9BT25 410 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 MENTQ9BUN1 341 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SLC29A3Q9BZD2 475 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 ZMYND15Q9H091 742 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SPNS1Q9H2V7 528 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 KIR3DX1Q9H7L2 352 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 WASH6PQ9NQA3 447 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 FSCN3Q9NQT6 498 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SPHK1Q9NYA1 384 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 CCDC167Q9P0B6 97 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SPATA7Q9P0W8 599 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 PCOLCE2Q9UKZ9 415 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SLC12A4Q9UP95 1085 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 KLHL20Q9Y2M5 609 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 KCNE1BA0A087WTH5 132 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 FEZF1A0PJY2 475 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 PIPSLA2A3N6 862 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 A6NCN8 305 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 OR6C74A6NCV1 312 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 PSMD12O00232 456 aaPredicted RBP3.58□□□□□ -1.84
RTN4-208ENST00000404909 VILLO15195 856 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 YY2O15391 372 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 GPR37L1O60883 481 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 VPS4BO75351 444 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 CFIP05156 583 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SERPIND1P05546 499 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 C1GALT1C1LP0DN25 315 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 PIK3R1P27986 724 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 PKLRP30613 574 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 HOXA6P31267 233 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 HNF4AP41235 474 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 MAZP56270 477 aaKnown RBP3.58□□□□□ -1.84
RTN4-208ENST00000404909 HNRNPKP61978 463 aaKnown RBP eCLIP3.58□□□□□ -1.846e-10■□□□□ 9.3
RTN4-208ENST00000404909 CYP4F2P78329 520 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms