RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 GALNT7Q86SF2 657 aa17.41■□□□□ 0.38
PTPRN2-204ENST00000404321 SYVN1Q86TM6 617 aa17.41■□□□□ 0.38
PTPRN2-204ENST00000404321 CCDC25Q86WR0 208 aa17.41■□□□□ 0.38
PTPRN2-204ENST00000404321 PALM2Q8IXS6 379 aa17.41■□□□□ 0.38
PTPRN2-204ENST00000404321 OR4N4Q8N0Y3 316 aa17.41■□□□□ 0.38
PTPRN2-204ENST00000404321 METTL27Q8N6F8 245 aaPredicted RBP17.41■□□□□ 0.38
PTPRN2-204ENST00000404321 GBP5Q96PP8 586 aa17.41■□□□□ 0.38
PTPRN2-204ENST00000404321 NLNQ9BYT8 704 aa17.41■□□□□ 0.38
PTPRN2-204ENST00000404321 SMYD2Q9NRG4 433 aa17.41■□□□□ 0.38
PTPRN2-204ENST00000404321 GEMIN8Q9NWZ8 242 aaKnown RBP17.41■□□□□ 0.38
PTPRN2-204ENST00000404321 NDOR1Q9UHB4 597 aa17.41■□□□□ 0.38
PTPRN2-204ENST00000404321 TCFL5Q9UL49 500 aa17.41■□□□□ 0.38
PTPRN2-204ENST00000404321 SRPK3Q9UPE1 567 aa17.41■□□□□ 0.38
PTPRN2-204ENST00000404321 PDE10AQ9Y233 779 aa17.41■□□□□ 0.38
PTPRN2-204ENST00000404321 MAN2B2Q9Y2E5 1009 aa17.41■□□□□ 0.38
PTPRN2-204ENST00000404321 KCNMB2Q9Y691 235 aa17.41■□□□□ 0.38
PTPRN2-204ENST00000404321 CFAP46Q8IYW2 2715 aa17.41■□□□□ 0.38
PTPRN2-204ENST00000404321 ZNF839A8K0R7 811 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 EIF3FO00303 357 aaPredicted RBP17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 FKBP9O95302 570 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 TSPAN12O95859 305 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 RAB40ALP0C0E4 278 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 IMPA1P29218 277 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 IL2P60568 153 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 PHKG1Q16816 387 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 UGT8Q16880 541 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 WASHC2DQ5SRD0 308 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 ICE2Q659A1 982 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 FAM45BPQ6NSW5 357 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 ZNF572Q7Z3I7 529 aaPredicted RBP17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 ZC3HC1Q86WB0 502 aaKnown RBP17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 DTWD1Q8N5C7 304 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 FAM45AQ8TCE6 357 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 FBXO25Q8TCJ0 367 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 MCOLN3Q8TDD5 553 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 ALKBH8Q96BT7 664 aaKnown RBP17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 RAB17Q9H0T7 212 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 STOX2Q9P2F5 926 aaPredicted RBP17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 IFT80Q9P2H3 777 aaPredicted RBP17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 IGKV1-8A0A0C4DH67 115 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 OR2A25A4D2G3 310 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 CXorf49A8MYA2 514 aaPredicted RBP17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 C8GP07360 202 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 DCDP81605 110 aaKnown RBP17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 CHAF1BQ13112 559 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 ZNF460Q14592 562 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 LRRC8EQ6NSJ5 796 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 FBXO42Q6P3S6 717 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 TMEM207Q6UWW9 146 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 ZDHHC24Q6UX98 284 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 ADCK2Q7Z695 626 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 TMEM151BQ8IW70 566 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 LRRC56Q8IYG6 542 aaPredicted RBP17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 PROKR1Q8TCW9 393 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 DPH2Q9BQC3 489 aaPredicted RBP17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 PLCD4Q9BRC7 762 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 LRRC1Q9BTT6 524 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 ATG10Q9H0Y0 220 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 SYNPO2LQ9H987 977 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 PARVBQ9HBI1 364 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 ZNF71Q9NQZ8 489 aaPredicted RBP17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 CUTCQ9NTM9 273 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 GPN3Q9UHW5 284 aaPredicted RBP17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 CORO1CQ9ULV4 474 aaPredicted RBP17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 KLK4Q9Y5K2 254 aa17.4■□□□□ 0.38
PTPRN2-204ENST00000404321 FAM95CA0A1B0GW59 222 aa17.39■□□□□ 0.37
PTPRN2-204ENST00000404321 DNAJB5O75953 348 aa17.39■□□□□ 0.37
PTPRN2-204ENST00000404321 TBPL1P62380 186 aa17.39■□□□□ 0.37
PTPRN2-204ENST00000404321 PRDX1Q06830 199 aaKnown RBP17.39■□□□□ 0.37
PTPRN2-204ENST00000404321 GRM7Q14831 915 aa17.39■□□□□ 0.37
PTPRN2-204ENST00000404321 NKAIN1Q4KMZ8 207 aa17.39■□□□□ 0.37
PTPRN2-204ENST00000404321 CPZQ66K79 652 aa17.39■□□□□ 0.37
PTPRN2-204ENST00000404321 C8orf74Q6P047 294 aa17.39■□□□□ 0.37
PTPRN2-204ENST00000404321 RNF44Q7L0R7 432 aa17.39■□□□□ 0.37
PTPRN2-204ENST00000404321 PLD3Q8IV08 490 aa17.39■□□□□ 0.37
PTPRN2-204ENST00000404321 TTC29Q8NA56 475 aaPredicted RBP17.39■□□□□ 0.37
PTPRN2-204ENST00000404321 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.39■□□□□ 0.37
PTPRN2-204ENST00000404321 ZFYVE21Q9BQ24 234 aa17.39■□□□□ 0.37
PTPRN2-204ENST00000404321 ADNPQ9H2P0 1102 aa17.39■□□□□ 0.37
PTPRN2-204ENST00000404321 CUEDC1Q9NWM3 386 aaPredicted RBP17.39■□□□□ 0.37
PTPRN2-204ENST00000404321 IKZF3Q9UKT9 509 aa17.39■□□□□ 0.37
PTPRN2-204ENST00000404321 A0A1B0GX78 115 aa17.38■□□□□ 0.37
PTPRN2-204ENST00000404321 ARGFXA6NJG6 315 aa17.38■□□□□ 0.37
PTPRN2-204ENST00000404321 EIF3HO15372 352 aaKnown RBP eCLIP17.38■□□□□ 0.375e-6■■□□□ 11.8
PTPRN2-204ENST00000404321 CCNDBP1O95273 360 aa17.38■□□□□ 0.37
PTPRN2-204ENST00000404321 MED26O95402 600 aa17.38■□□□□ 0.37
PTPRN2-204ENST00000404321 SFTPCP11686 197 aa17.38■□□□□ 0.37
PTPRN2-204ENST00000404321 ITGAXP20702 1163 aa17.38■□□□□ 0.37
PTPRN2-204ENST00000404321 OTX2P32243 289 aa17.38■□□□□ 0.37
PTPRN2-204ENST00000404321 GCGRP47871 477 aa17.38■□□□□ 0.37
PTPRN2-204ENST00000404321 ARSFP54793 590 aa17.38■□□□□ 0.37
PTPRN2-204ENST00000404321 TAS2R39P59534 338 aa17.38■□□□□ 0.37
PTPRN2-204ENST00000404321 GPX6P59796 221 aa17.38■□□□□ 0.37
PTPRN2-204ENST00000404321 CBLBQ13191 982 aa17.38■□□□□ 0.37
PTPRN2-204ENST00000404321 SP140Q13342 867 aa17.38■□□□□ 0.37
PTPRN2-204ENST00000404321 WHAMMP3Q1A5X7 153 aa17.38■□□□□ 0.37
PTPRN2-204ENST00000404321 TCTE1Q5JU00 501 aa17.38■□□□□ 0.37
PTPRN2-204ENST00000404321 SLC26A11Q86WA9 606 aa17.38■□□□□ 0.37
PTPRN2-204ENST00000404321 PAQR7Q86WK9 346 aa17.38■□□□□ 0.37
PTPRN2-204ENST00000404321 PTRH1Q86Y79 214 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms