RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 PTSQ03393 145 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 NADK2Q4G0N4 442 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 ATP13A5Q4VNC0 1218 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 SGO1Q5FBB7 561 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 NHSL2Q5HYW2 709 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 ZC3H14Q6PJT7 736 aaKnown RBP15.1■□□□□ 0.01
CCDC40-202ENST00000374876 DLEU7Q6UYE1 221 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.1■□□□□ 0.01
CCDC40-202ENST00000374876 TMIEQ8NEW7 156 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 NCSTNQ92542 709 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 ARRDC3Q96B67 414 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 DGCR14Q96DF8 476 aaKnown RBP15.1■□□□□ 0.01
CCDC40-202ENST00000374876 TOE1Q96GM8 510 aaKnown RBP15.1■□□□□ 0.01
CCDC40-202ENST00000374876 NTMT1Q9BV86 223 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 ANKRD60Q9BZ19 345 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 IRF2BPLQ9H1B7 796 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 PNPLA3Q9NST1 481 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 TRPS1Q9UHF7 1281 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 ZNF490Q9ULM2 529 aaPredicted RBP15.1■□□□□ 0.01
CCDC40-202ENST00000374876 PPIL1Q9Y3C6 166 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 FANCMQ8IYD8 2048 aa15.1■□□□□ 0.01
CCDC40-202ENST00000374876 PDLIM1O00151 329 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 ADH1BP00325 375 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 PRNPP04156 253 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 UGT2B4P06133 528 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 OR56A5P0C7T3 313 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 C7P10643 843 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 C5AR1P21730 350 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 ACSL1P33121 698 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 PWP1Q13610 501 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 APOFQ13790 326 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 ADRM1Q16186 407 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 SMU1Q2TAY7 513 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 CACHD1Q5VU97 1274 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 FAM46CQ5VWP2 391 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 MBOAT1Q6ZNC8 495 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 TBC1D21Q8IYX1 336 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 METTL25Q8N6Q8 603 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 MFSD2AQ8NA29 543 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 MCCC1Q96RQ3 725 aaPredicted RBP15.09■□□□□ 0.01
CCDC40-202ENST00000374876 CGREF1Q99674 301 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 HAUS8Q9BT25 410 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 CPEB1Q9BZB8 566 aaKnown RBP15.09■□□□□ 0.01
CCDC40-202ENST00000374876 FARSBQ9NSD9 589 aaKnown RBP15.09■□□□□ 0.01
CCDC40-202ENST00000374876 ARL15Q9NXU5 204 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 KLHL42Q9P2K6 505 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 MAGEL2Q9UJ55 1249 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 OAZ3Q9UMX2 235 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 USP22Q9UPT9 525 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 C1QTNF3-AMACRE9PGA6 284 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 RSL1D1O76021 490 aaKnown RBP15.09■□□□□ 0.01
CCDC40-202ENST00000374876 KCNH1O95259 989 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 H6PDO95479 791 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 ETS2P15036 469 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 LHCGRP22888 699 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 CD6P30203 668 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 CNR2P34972 360 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 GNPDA1P46926 289 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 RPIAP49247 311 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 OR4D2P58180 307 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 MTPNP58546 118 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 HMGCS1Q01581 520 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 NHLH1Q02575 133 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 CNTN1Q12860 1018 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 PTGR1Q14914 329 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 TMTC4Q5T4D3 741 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 ZDHHC20Q5W0Z9 365 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 RBM44Q6ZP01 1051 aaKnown RBP15.09■□□□□ 0.01
CCDC40-202ENST00000374876 RNF165Q6ZSG1 346 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 TRIM46Q7Z4K8 759 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 EPHX4Q8IUS5 362 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 HOMEZQ8IX15 550 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 TMEFF1Q8IYR6 380 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 TSPAN14Q8NG11 270 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 NUDT8Q8WV74 236 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 SKA2Q8WVK7 121 aaPredicted RBP15.09■□□□□ 0.01
CCDC40-202ENST00000374876 TFAP2CQ92754 450 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 BIRC7Q96CA5 298 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 SPACA7Q96KW9 195 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 NSMCE2Q96MF7 247 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 ZNF641Q96N77 438 aaPredicted RBP15.09■□□□□ 0.01
CCDC40-202ENST00000374876 RPF2Q9H7B2 306 aaKnown RBP15.09■□□□□ 0.01
CCDC40-202ENST00000374876 C8orf4Q9NR00 106 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 WSB2Q9NYS7 404 aaPredicted RBP15.09■□□□□ 0.01
CCDC40-202ENST00000374876 NCKAP1Q9Y2A7 1128 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 MYRFQ9Y2G1 1151 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 PCDHB3Q9Y5E6 796 aa15.09■□□□□ 0.01
CCDC40-202ENST00000374876 MANBAO00462 879 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 SEC22BO75396 215 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 CLDN9O95484 217 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 HRH2P25021 359 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 AKT1P31749 480 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 CCR7P32248 378 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 NR1H2P55055 460 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 B4GALNT1Q00973 533 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 PLIN5Q00G26 463 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 RPL6Q02878 288 aaKnown RBP15.08■□□□□ 0
CCDC40-202ENST00000374876 ATP6AP1Q15904 470 aa15.08■□□□□ 0
CCDC40-202ENST00000374876 FXNQ16595 210 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms