RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 POM121BA6NF01 834 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 AGAP14A8MT82 685 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 C10orf142B7Z368 130 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 PRMT5O14744 637 aaPredicted RBP13.88□□□□□ -0.19
HMGA1-203ENST00000374116 GPR39O43194 453 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 MATN4O95460 622 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 ESRRBO95718 433 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 CHEK2O96017 543 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 PCCBP05166 539 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 UROSP10746 265 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 MRPL19P49406 292 aaKnown RBP13.88□□□□□ -0.19
HMGA1-203ENST00000374116 OGFOD2Q6N063 350 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 SPATA19Q7Z5L4 167 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 TRIML2Q8N7C3 387 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 OR56A4Q8NGH8 313 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 OR9I1Q8NGQ6 314 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 ZNF420Q8TAQ5 688 aaPredicted RBP13.88□□□□□ -0.19
HMGA1-203ENST00000374116 FOXJ1Q92949 421 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 EME1Q96AY2 570 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 TUBGCP3Q96CW5 907 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 KCNA7Q96RP8 456 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 DOK1Q99704 481 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 OSBPL11Q9BXB4 747 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 ABCG8Q9H221 673 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 AASDHPPTQ9NRN7 309 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 TMEM181Q9P2C4 612 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 CD300AQ9UGN4 299 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 POLG2Q9UHN1 485 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 PTBP2Q9UKA9 531 aaKnown RBP13.88□□□□□ -0.19
HMGA1-203ENST00000374116 DHRS7Q9Y394 339 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 RNF11Q9Y3C5 154 aa13.88□□□□□ -0.19
HMGA1-203ENST00000374116 GIPC1O14908 333 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 LINC00032P0C843 101 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 OCM2P0CE71 109 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 OCMP0CE72 109 aaPredicted RBP13.87□□□□□ -0.19
HMGA1-203ENST00000374116 BPIP17213 487 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 S100A1P23297 94 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 CSNK1EP49674 416 aaKnown RBP13.87□□□□□ -0.19
HMGA1-203ENST00000374116 CCR5P51681 352 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 GRIK2Q13002 908 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 NFATC2Q13469 925 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 GK3PQ14409 553 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 GRB7Q14451 532 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 IRF4Q15306 451 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 WSCD2Q2TBF2 565 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 KCTD21Q4G0X4 260 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 C6orf52Q5T4I8 152 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 TCEAL6Q6IPX3 200 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 PRMT9Q6P2P2 845 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 NEK5Q6P3R8 708 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 DNAJC14Q6Y2X3 702 aaPredicted RBP13.87□□□□□ -0.19
HMGA1-203ENST00000374116 SNX20Q7Z614 316 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 CPNE9Q8IYJ1 553 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 GPR26Q8NDV2 337 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 TCEAL3Q969E4 200 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 COQ10AQ96MF6 247 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 PHF12Q96QT6 1004 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 HGH1Q9BTY7 390 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 SDR39U1Q9NRG7 319 aaPredicted RBP13.87□□□□□ -0.19
HMGA1-203ENST00000374116 NUDT4Q9NZJ9 180 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 CD274Q9NZQ7 290 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 SELENONQ9NZV5 590 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 RAB23Q9ULC3 237 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 RALGAPA1Q6GYQ0 2036 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 SCN8AQ9UQD0 1980 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 ADAMTS9Q9P2N4 1935 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 ZNF106Q9H2Y7 1883 aaKnown RBP13.87□□□□□ -0.19
HMGA1-203ENST00000374116 TRIM64A6NGJ6 449 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 NCF1BA6NI72 391 aaPredicted RBP13.87□□□□□ -0.19
HMGA1-203ENST00000374116 NCF1CA8MVU1 366 aaPredicted RBP13.87□□□□□ -0.19
HMGA1-203ENST00000374116 PRAMEF1O95521 474 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 WNT1P04628 370 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 HGFP14210 728 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 NCF1P14598 390 aaPredicted RBP13.87□□□□□ -0.19
HMGA1-203ENST00000374116 ZNF7P17097 686 aaPredicted RBP13.87□□□□□ -0.19
HMGA1-203ENST00000374116 TCN1P20061 433 aaPredicted RBP13.87□□□□□ -0.19
HMGA1-203ENST00000374116 HOXD11P31277 338 aaPredicted RBP13.87□□□□□ -0.19
HMGA1-203ENST00000374116 IGFALSP35858 605 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 HK3P52790 923 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 NHLH1Q02575 133 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 RPS6KA2Q15349 733 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 RBBP7Q16576 425 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 ZBED5Q49AG3 693 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 COQ5Q5HYK3 327 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 DEPDC1Q5TB30 811 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 LYPLAL1Q5VWZ2 237 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 FAM151BQ6UXP7 276 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 CYP2U1Q7Z449 544 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 TECPR1Q7Z6L1 1165 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 SYVN1Q86TM6 617 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 SERPINA9Q86WD7 417 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 TMEM102Q8N9M5 508 aaPredicted RBP13.87□□□□□ -0.19
HMGA1-203ENST00000374116 TP53I13Q8NBR0 393 aaPredicted RBP13.87□□□□□ -0.19
HMGA1-203ENST00000374116 DDHD1Q8NEL9 900 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 TSPEARQ8WU66 669 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 NUS1Q96E22 293 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 HOPXQ9BPY8 73 aaPredicted RBP13.87□□□□□ -0.19
HMGA1-203ENST00000374116 TM9SF3Q9HD45 589 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 PILRBQ9UKJ0 227 aa13.87□□□□□ -0.19
HMGA1-203ENST00000374116 MYRFQ9Y2G1 1151 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms