RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 DPH7Q9BTV6 452 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 ACAT2Q9BWD1 397 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 DPH5Q9H2P9 285 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 SYNPO2LQ9H987 977 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 PPANQ9NQ55 473 aaKnown RBP18.16■□□□□ 0.5
CKS1B-203ENST00000368439 SLC22A11Q9NSA0 550 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 PSAT1Q9Y617 370 aa18.16■□□□□ 0.5
CKS1B-203ENST00000368439 NDC80O14777 642 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 CNOT3O75175 753 aaKnown RBP18.15■□□□□ 0.5
CKS1B-203ENST00000368439 ONECUT2O95948 504 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 FDXRP22570 491 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 IMPA1P29218 277 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 CMPK1P30085 196 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 PMS2P54278 862 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 DCDP81605 110 aaKnown RBP18.15■□□□□ 0.5
CKS1B-203ENST00000368439 PRDX1Q06830 199 aaKnown RBP18.15■□□□□ 0.5
CKS1B-203ENST00000368439 HECTD2Q5U5R9 776 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 LRRC8EQ6NSJ5 796 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 MRPL14Q6P1L8 145 aaKnown RBP18.15■□□□□ 0.5
CKS1B-203ENST00000368439 PAQR7Q86WK9 346 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 THAP4Q8WY91 577 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 ABHD17AQ96GS6 310 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 OLFM1Q99784 485 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 SELENOSQ9BQE4 189 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 MCMBPQ9BTE3 642 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 NDC1Q9BTX1 674 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 DHRS4Q9BTZ2 278 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 TAC3Q9UHF0 121 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 CORO1CQ9ULV4 474 aaPredicted RBP18.15■□□□□ 0.5
CKS1B-203ENST00000368439 SNX7Q9UNH6 387 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 PDE10AQ9Y233 779 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 MAN2B2Q9Y2E5 1009 aa18.15■□□□□ 0.5
CKS1B-203ENST00000368439 LOC105369274A0A096LPK9 316 aa18.14■□□□□ 0.49
CKS1B-203ENST00000368439 LOC102723532A0A0G2JNH3 316 aa18.14■□□□□ 0.49
CKS1B-203ENST00000368439 ZNF839A8K0R7 811 aa18.14■□□□□ 0.49
CKS1B-203ENST00000368439 SRPX2O60687 465 aaPredicted RBP18.14■□□□□ 0.49
CKS1B-203ENST00000368439 MED26O95402 600 aa18.14■□□□□ 0.49
CKS1B-203ENST00000368439 SYF2O95926 243 aaKnown RBP18.14■□□□□ 0.49
CKS1B-203ENST00000368439 RPA3P35244 121 aaPredicted RBP18.14■□□□□ 0.49
CKS1B-203ENST00000368439 MGAT5Q09328 741 aa18.14■□□□□ 0.49
CKS1B-203ENST00000368439 TCTE1Q5JU00 501 aa18.14■□□□□ 0.49
CKS1B-203ENST00000368439 ICE2Q659A1 982 aa18.14■□□□□ 0.49
CKS1B-203ENST00000368439 ZNF425Q6IV72 752 aa18.14■□□□□ 0.49
CKS1B-203ENST00000368439 TMEM151BQ8IW70 566 aa18.14■□□□□ 0.49
CKS1B-203ENST00000368439 ZBED8Q8IZ13 594 aa18.14■□□□□ 0.49
CKS1B-203ENST00000368439 OR4N4Q8N0Y3 316 aa18.14■□□□□ 0.49
CKS1B-203ENST00000368439 PLCD4Q9BRC7 762 aa18.14■□□□□ 0.49
CKS1B-203ENST00000368439 TRIM55Q9BYV6 548 aa18.14■□□□□ 0.49
CKS1B-203ENST00000368439 MRPS30Q9NP92 439 aaKnown RBP18.14■□□□□ 0.49
CKS1B-203ENST00000368439 SMYD2Q9NRG4 433 aa18.14■□□□□ 0.49
CKS1B-203ENST00000368439 TXLNGQ9NUQ3 528 aa18.14■□□□□ 0.49
CKS1B-203ENST00000368439 IRAK4Q9NWZ3 460 aa18.14■□□□□ 0.49
CKS1B-203ENST00000368439 ANKMY1Q9P2S6 941 aa18.14■□□□□ 0.49
CKS1B-203ENST00000368439 VWA7Q9Y334 891 aa18.14■□□□□ 0.49
CKS1B-203ENST00000368439 A0A0J9YVX5 310 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 A0A1B0GX78 115 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 C9J4A7 227 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 SLC16A5O15375 505 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 C8GP07360 202 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 RGS4P49798 205 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 ARSFP54793 590 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 VSX2P58304 361 aaPredicted RBP18.13■□□□□ 0.49
CKS1B-203ENST00000368439 CALCOCO2Q13137 446 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 SP140Q13342 867 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 GRM7Q14831 915 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 NAA25Q14CX7 972 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 TRADDQ15628 312 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 NKAIN1Q4KMZ8 207 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 WASHC2DQ5SRD0 308 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 YOD1Q5VVQ6 348 aaPredicted RBP18.13■□□□□ 0.49
CKS1B-203ENST00000368439 FAM45BPQ6NSW5 357 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 TMEM207Q6UWW9 146 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 TTLL10Q6ZVT0 673 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 ZC3HC1Q86WB0 502 aaKnown RBP18.13■□□□□ 0.49
CKS1B-203ENST00000368439 GPATCH11Q8N954 259 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 FAM45AQ8TCE6 357 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 LINGO1Q96FE5 620 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 C17orf62Q9BQA9 187 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 CUTCQ9NTM9 273 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 ZFATQ9P243 1243 aa18.13■□□□□ 0.49
CKS1B-203ENST00000368439 STOX2Q9P2F5 926 aaPredicted RBP18.13■□□□□ 0.49
CKS1B-203ENST00000368439 NUP210LQ5VU65 1888 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 TNRC6AQ8NDV7 1962 aaKnown RBP18.12■□□□□ 0.49
CKS1B-203ENST00000368439 K7EM74 188 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 DSCR3O14972 297 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 EIF3HO15372 352 aaKnown RBP eCLIP18.12■□□□□ 0.49
CKS1B-203ENST00000368439 RFPL1O75677 317 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 DNAJB5O75953 348 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 FOXL2P58012 376 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 SLC9A5Q14940 896 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 PHKG1Q16816 387 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 ZXDCQ2QGD7 858 aaPredicted RBP18.12■□□□□ 0.49
CKS1B-203ENST00000368439 MLIPQ5VWP3 458 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 CPZQ66K79 652 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 MBOAT1Q6ZNC8 495 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 COX15Q7KZN9 410 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 SLC26A11Q86WA9 606 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 MYO1HQ8N1T3 1032 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 DTWD1Q8N5C7 304 aa18.12■□□□□ 0.49
CKS1B-203ENST00000368439 C9orf43Q8TAL5 461 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms