RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 NPIPA8P0DM63 369 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 DRD4P21917 467 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 SLC11A1P49279 550 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 CCR8P51685 355 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 LCN1P1Q5VSP4 162 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 C1orf127Q8N9H9 656 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 CLEC4DQ8WXI8 215 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 CPNE2Q96FN4 548 aaPredicted RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 LRRC46Q96FV0 321 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 FAM163AQ96GL9 167 aaPredicted RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 SH3YL1Q96HL8 342 aaPredicted RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 CSPG4P5Q96PW8 444 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 TBC1D10AQ9BXI6 508 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 GBA3Q9H227 469 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 MEAF6Q9HAF1 191 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 TDP1Q9NUW8 608 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 GDAP2Q9NXN4 497 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 IFT80Q9P2H3 777 aaPredicted RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 DNAJB4Q9UDY4 337 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 ANKRD33BA6NCL7 494 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 KCNQ1P51787 676 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 VSX2P58304 361 aaPredicted RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 CD47Q08722 323 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 SEMA3AQ14563 771 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 SUSD1Q6UWL2 747 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 SLC39A5Q6ZMH5 540 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 SLC9B2Q86UD5 537 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 PHC3Q8NDX5 983 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 ZNF184Q99676 751 aaPredicted RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 P2RY13Q9BPV8 354 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 ZNF670Q9BS34 389 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 GIN1Q9NXP7 522 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 TLL2Q9Y6L7 1015 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 NALCNQ8IZF0 1738 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 ATRNL1Q5VV63 1379 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 CLUHO75153 1309 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 CENPBD1B2RD01 187 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 SMAD9O15198 467 aaKnown RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 C4BPAP04003 597 aaKnown RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 FESP07332 822 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 ADSSP30520 456 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 MAGEA3P43357 314 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 ABCA11PQ4W5N1 156 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 CPNE9Q8IYJ1 553 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 SYNPOQ8N3V7 929 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 ASB15Q8WXK1 588 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 PPM1MQ96MI6 270 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 TXNRD2Q9NNW7 524 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 RAB26Q9ULW5 256 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 STXBP5LQ9Y2K9 1186 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 OAS3Q9Y6K5 1087 aaKnown RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 LOXHD1Q8IVV2 1947 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 GLOD5A6NK44 160 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 MID1O15344 667 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 SLC16A5O15375 505 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 KAT7O95251 611 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 SCTRP47872 440 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 AIMP2Q13155 320 aaKnown RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 GANABQ14697 944 aaKnown RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 SNAPC1Q16533 368 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 TNFAIP8L2Q6P589 184 aaPredicted RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 FRMD7Q6ZUT3 714 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 FAM71AQ8IYT1 594 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 TCTEX1D2Q8WW35 142 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 MALSU1Q96EH3 234 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 RABL2AQ9UBK7 228 aaPredicted RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 EIF2B4Q9UI10 523 aaKnown RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 ATXN7L1Q9ULK2 861 aaPredicted RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 CA5BQ9Y2D0 317 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 TEX13CA0A0J9YWL9 993 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 A0A1W2PPL8 197 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 KLK1P06870 262 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 CA3P07451 260 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 FHP07954 510 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 NELFEP18615 380 aaKnown RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 CXCR1P25024 350 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 MTHFRP42898 656 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 GRK6P43250 576 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 GPD2P43304 727 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 CHIT1Q13231 466 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 BCL2A1Q16548 175 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 GCNT6Q5T4J0 391 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 FAM69BQ5VUD6 431 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 TMPRSS11AQ6ZMR5 421 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 CYP2U1Q7Z449 544 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 TMC3Q7Z5M5 1100 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 SLC34A3Q8N130 599 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 CRYBG2Q8N1P7 616 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 TXNDC5Q8NBS9 432 aaKnown RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 RHBDD1Q8TEB9 315 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 SNX33Q8WV41 574 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 RIT1Q92963 219 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 C11orf24Q96F05 449 aaPredicted RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 ZNF578Q96N58 590 aaPredicted RBP6.91□□□□□ -1.3
SPTA1-201ENST00000368147 RAD9AQ99638 391 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 RXFP1Q9HBX9 757 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 ADAP2Q9NPF8 381 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 CENPMQ9NSP4 180 aa6.91□□□□□ -1.3
SPTA1-201ENST00000368147 MTRRQ9UBK8 725 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms