RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 ZSWIM8A7E2V4 1837 aa6.42□□□□□ -1.38
TRIM38-201ENST00000357085 ATP6AP2O75787 350 aa6.42□□□□□ -1.38
TRIM38-201ENST00000357085 METTL18O95568 372 aa6.42□□□□□ -1.38
TRIM38-201ENST00000357085 LDOC1O95751 146 aaPredicted RBP6.42□□□□□ -1.38
TRIM38-201ENST00000357085 COX7A2P14406 83 aa6.42□□□□□ -1.38
TRIM38-201ENST00000357085 PXDC1Q5TGL8 231 aa6.42□□□□□ -1.38
TRIM38-201ENST00000357085 PTCHD4Q6ZW05 846 aa6.42□□□□□ -1.38
TRIM38-201ENST00000357085 ADGRD2Q7Z7M1 963 aa6.42□□□□□ -1.38
TRIM38-201ENST00000357085 CHDHQ8NE62 594 aaPredicted RBP6.42□□□□□ -1.38
TRIM38-201ENST00000357085 OR7G3Q8NG95 312 aa6.42□□□□□ -1.38
TRIM38-201ENST00000357085 SMAP2Q8WU79 429 aaPredicted RBP6.42□□□□□ -1.38
TRIM38-201ENST00000357085 EEF1AKMT1Q8WVE0 214 aa6.42□□□□□ -1.38
TRIM38-201ENST00000357085 ABCC13Q9NSE7 274 aa6.42□□□□□ -1.38
TRIM38-201ENST00000357085 ERVK-18Q9QC07 812 aa6.42□□□□□ -1.38
TRIM38-201ENST00000357085 EMCNQ9ULC0 261 aa6.42□□□□□ -1.38
TRIM38-201ENST00000357085 MAFBQ9Y5Q3 323 aaPredicted RBP6.42□□□□□ -1.38
TRIM38-201ENST00000357085 NUBP2Q9Y5Y2 271 aa6.42□□□□□ -1.38
TRIM38-201ENST00000357085 B4GAT1O43505 415 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 RBM34P42696 430 aaKnown RBP6.41□□□□□ -1.38
TRIM38-201ENST00000357085 GDI2P50395 445 aaKnown RBP6.41□□□□□ -1.38
TRIM38-201ENST00000357085 ADARB1P78563 741 aaKnown RBP6.41□□□□□ -1.38
TRIM38-201ENST00000357085 SF3A2Q15428 464 aaKnown RBP6.41□□□□□ -1.38
TRIM38-201ENST00000357085 SERPINA11Q86U17 422 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 ZDHHC21Q8IVQ6 265 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 UBA3Q8TBC4 463 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 ASB15Q8WXK1 588 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 ZNF778Q96MU6 729 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 UROC1Q96N76 676 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 CEP41Q9BYV8 373 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 CRISPLD1Q9H336 500 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 RBFOX1Q9NWB1 397 aaKnown RBP6.41□□□□□ -1.38
TRIM38-201ENST00000357085 EDARQ9UNE0 448 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 PMPCBO75439 489 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 RASGRP1O95267 797 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 CBX5P45973 191 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 CACNG1Q06432 222 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 KCNC3Q14003 757 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 DET1Q7L5Y6 550 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 ZSWIM9Q86XI8 627 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 CILP2Q8IUL8 1156 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 TMEM192Q8IY95 271 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 MEIOBQ8N635 442 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 OR4F6Q8NGB9 312 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 OR4L1Q8NH43 312 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 DNAJB3Q8WWF6 145 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 BIN3Q9NQY0 253 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 DNMT3LQ9UJW3 386 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 PCDHAC2Q9Y5I4 1007 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 C2orf74A8MZ97 194 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 SSX5O60225 188 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 PSIP1O75475 530 aaKnown RBP6.41□□□□□ -1.38
TRIM38-201ENST00000357085 MT-ND2P03891 347 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 ACADMP11310 421 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 HTR2AP28223 471 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 RPL9P32969 192 aaKnown RBP6.41□□□□□ -1.38
TRIM38-201ENST00000357085 DUSP7Q16829 419 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 SYTL3Q4VX76 610 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 CDC26Q8NHZ8 85 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 PABPC5Q96DU9 382 aaKnown RBP6.41□□□□□ -1.38
TRIM38-201ENST00000357085 CDC6Q99741 560 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 CNPPD1Q9BV87 410 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 BTBD1Q9H0C5 482 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 NTN4Q9HB63 628 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 SEMA4BQ9NPR2 832 aaPredicted RBP6.41□□□□□ -1.38
TRIM38-201ENST00000357085 MRPS7Q9Y2R9 242 aaKnown RBP6.41□□□□□ -1.38
TRIM38-201ENST00000357085 A0A1B0GTW7 788 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 LHCGRP22888 699 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 HEPACAMQ14CZ8 416 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 CLEC6AQ6EIG7 209 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 LRRN1Q6UXK5 716 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 RNF111Q6ZNA4 994 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 KRT77Q7Z794 578 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 RAVER1Q8IY67 606 aaKnown RBP6.41□□□□□ -1.38
TRIM38-201ENST00000357085 GPR150Q8NGU9 434 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 TESCQ96BS2 214 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 PYURFQ96I23 114 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 TBCDQ9BTW9 1192 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 RANGRFQ9HD47 186 aaPredicted RBP6.41□□□□□ -1.38
TRIM38-201ENST00000357085 INPP5EQ9NRR6 644 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 OSGIN1Q9UJX0 560 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 LTBP4Q8N2S1 1624 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 PARP14Q460N5 1801 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 MAGEB17A8MXT2 336 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 MATN3O15232 486 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 C1QBP02746 253 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 ITGB1P05556 798 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 GSTM1P09488 218 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 GOT1P17174 413 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 ADRA1BP35368 520 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 FLI1Q01543 452 aaPredicted RBP6.41□□□□□ -1.38
TRIM38-201ENST00000357085 SWI5Q1ZZU3 235 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 TOR2AQ5JU69 321 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 DENND6AQ8IWF6 608 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 CFAP206Q8IYR0 622 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 TMEM80Q96HE8 168 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 KCNH6Q9H252 994 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 TLR8Q9NR97 1041 aaKnown RBP6.41□□□□□ -1.38
TRIM38-201ENST00000357085 ASIC5Q9NY37 505 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 FLRT1Q9NZU1 646 aa6.41□□□□□ -1.38
TRIM38-201ENST00000357085 MARK1Q9P0L2 795 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms