RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 PLSCR1O15162 318 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 HSD17B2P37059 387 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 SIRPB2Q5JXA9 342 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 NUDT13Q86X67 352 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 GALNT12Q8IXK2 581 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 OR9I1Q8NGQ6 314 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 TRPM4Q8TD43 1214 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 C12orf66Q96MD2 445 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 TRBC2A0A5B9 178 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 TYROBPO43914 113 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 RNASEH2AO75792 299 aaKnown RBP14.49□□□□□ -0.09
CHD4-201ENST00000357008 NUDT6P53370 316 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 MC1RQ01726 317 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 SP3Q02447 781 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 XKR4Q5GH76 650 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 PRAMEF17Q5VTA0 474 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 PSRC1Q6PGN9 363 aaPredicted RBP14.49□□□□□ -0.09
CHD4-201ENST00000357008 TTLQ8NG68 377 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 NKD1Q969G9 470 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 ZC3H10Q96K80 434 aaKnown RBP14.49□□□□□ -0.09
CHD4-201ENST00000357008 UCK2Q9BZX2 261 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 ZDHHC3Q9NYG2 299 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 SIRPGQ9P1W8 387 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 NUP50Q9UKX7 468 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 CPQQ9Y646 472 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 C5orf51A6NDU8 294 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 NOTOA8MTQ0 251 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 ATP4BP51164 291 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 PRPF38BQ5VTL8 546 aaKnown RBP14.49□□□□□ -0.09
CHD4-201ENST00000357008 MOB2Q70IA6 237 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 IQCHQ86VS3 1027 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 SMG7Q92540 1137 aaKnown RBP14.49□□□□□ -0.09
CHD4-201ENST00000357008 FRMD6Q96NE9 622 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 ITM2CQ9NQX7 267 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 A0A1W2PRQ8 180 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 SLC38A8A6NNN8 435 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 B3GALT2O43825 422 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 RENP00797 406 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 CFHP08603 1231 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 SELPP16109 830 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 MAGEA2P43356 314 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 RABGGTBP53611 331 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 CASP9P55211 416 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 PPP1R8Q12972 351 aaKnown RBP14.49□□□□□ -0.09
CHD4-201ENST00000357008 LRRC72A6NJI9 287 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 OR1I1O60431 355 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 AP2S1P53680 142 aaPredicted RBP14.49□□□□□ -0.09
CHD4-201ENST00000357008 SLC37A3Q8NCC5 494 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 ZCCHC10Q8TBK6 192 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 ISOC1Q96CN7 298 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 TM9SF3Q9HD45 589 aa14.49□□□□□ -0.09
CHD4-201ENST00000357008 TRBV23OR9-2A0A075B6M9 112 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 I3L521 148 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 M0R2N6 131 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 XPNPEP2O43895 674 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 OPN1SWP03999 348 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 OR3A3P47888 321 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 OR3A2P47893 321 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 ENTPD1P49961 510 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 TMBIM6P55061 237 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 CLEC12AQ5QGZ9 265 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 KIAA1614Q5VZ46 1190 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 SCAMP5Q8TAC9 235 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 GPR151Q8TDV0 419 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 KCTD13Q8WZ19 329 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 PYCR2Q96C36 320 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 RAB11FIP5Q9BXF6 653 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 GPN3Q9UHW5 284 aaPredicted RBP14.48□□□□□ -0.09
CHD4-201ENST00000357008 ARL6IP5O75915 188 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 ZNF3P17036 446 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 C6orf183Q5T699 404 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 ADGRD2Q7Z7M1 963 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 ZNF676Q8N7Q3 588 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 SPERTQ8NA61 448 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 CDRT1O95170 752 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 VLDLRP98155 873 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 SLBPQ14493 270 aaKnown RBP eCLIP14.48□□□□□ -0.09
CHD4-201ENST00000357008 PAFAH1B3Q15102 231 aaKnown RBP14.48□□□□□ -0.09
CHD4-201ENST00000357008 PRR23CQ6ZRP0 262 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 OR5T3Q8NGG3 340 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 PKP4Q99569 1192 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 LPIN3Q9BQK8 851 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 CSNK2A2P19784 350 aaPredicted RBP14.48□□□□□ -0.09
CHD4-201ENST00000357008 CDK6Q00534 326 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 GAD2Q05329 585 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 HDAC2Q92769 488 aaKnown RBP14.48□□□□□ -0.09
CHD4-201ENST00000357008 PRRG4Q9BZD6 226 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 SEC14L4Q9UDX3 406 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 SOWAHBA6NEL2 793 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 GMFGO60234 142 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 ZNF806P0C7X5 589 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 STOMP27105 288 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 OGDHQ02218 1023 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 ILF3Q12906 894 aaKnown RBP eCLIP14.48□□□□□ -0.092e-6■■■■□ 21.5
CHD4-201ENST00000357008 RABL3Q5HYI8 236 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 ZNF782Q6ZMW2 699 aaPredicted RBP14.48□□□□□ -0.09
CHD4-201ENST00000357008 NXPE1Q8N323 547 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 ARL14EPQ8N8R7 260 aaPredicted RBP14.48□□□□□ -0.09
CHD4-201ENST00000357008 OR4F6Q8NGB9 312 aa14.48□□□□□ -0.09
CHD4-201ENST00000357008 SEC14L1Q92503 715 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms