RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 STC1P52823 247 aa14.69□□□□□ -0.06
BRAT1-201ENST00000340611 YBX1P67809 324 aaKnown RBP14.69□□□□□ -0.06
BRAT1-201ENST00000340611 CTAG1AP78358 180 aa14.69□□□□□ -0.06
BRAT1-201ENST00000340611 GPLD1P80108 840 aa14.69□□□□□ -0.06
BRAT1-201ENST00000340611 TRAP1Q12931 704 aaKnown RBP14.69□□□□□ -0.06
BRAT1-201ENST00000340611 CSHL1Q14406 222 aa14.69□□□□□ -0.06
BRAT1-201ENST00000340611 CHRNA6Q15825 494 aa14.69□□□□□ -0.06
BRAT1-201ENST00000340611 SAMD4BQ5PRF9 694 aaKnown RBP14.69□□□□□ -0.06
BRAT1-201ENST00000340611 HECTD2Q5U5R9 776 aa14.69□□□□□ -0.06
BRAT1-201ENST00000340611 CLEC6AQ6EIG7 209 aa14.69□□□□□ -0.06
BRAT1-201ENST00000340611 PARS2Q7L3T8 475 aaKnown RBP14.69□□□□□ -0.06
BRAT1-201ENST00000340611 GALNT7Q86SF2 657 aa14.69□□□□□ -0.06
BRAT1-201ENST00000340611 CHPFQ8IZ52 775 aa14.69□□□□□ -0.06
BRAT1-201ENST00000340611 OR5H6Q8NGV6 325 aa14.69□□□□□ -0.06
BRAT1-201ENST00000340611 OR2T34Q8NGX1 318 aa14.69□□□□□ -0.06
BRAT1-201ENST00000340611 SCRN2Q96FV2 425 aa14.69□□□□□ -0.06
BRAT1-201ENST00000340611 GPR78Q96P69 363 aa14.69□□□□□ -0.06
BRAT1-201ENST00000340611 GAS2L1Q99501 681 aaPredicted RBP14.69□□□□□ -0.06
BRAT1-201ENST00000340611 TTYH2Q9BSA4 534 aa14.69□□□□□ -0.06
BRAT1-201ENST00000340611 MRPL40Q9NQ50 206 aaKnown RBP14.69□□□□□ -0.06
BRAT1-201ENST00000340611 NRP2O60462 931 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 BCAS1O75363 584 aaPredicted RBP14.68□□□□□ -0.06
BRAT1-201ENST00000340611 DEAF1O75398 565 aaPredicted RBP14.68□□□□□ -0.06
BRAT1-201ENST00000340611 MTX2O75431 263 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 BMP2P12643 396 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 TIMP2P16035 220 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 PSMD8P48556 350 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 TIAL1Q01085 375 aaKnown RBP eCLIP14.68□□□□□ -0.06
BRAT1-201ENST00000340611 FAM205BPQ63HN1 556 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 HEXDCQ8WVB3 486 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 ELMO1Q92556 727 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 PHF21BQ96EK2 531 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 TXNDC15Q96J42 360 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 SLC45A3Q96JT2 553 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 SLC30A3Q99726 388 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 CPEB1Q9BZB8 566 aaKnown RBP14.68□□□□□ -0.06
BRAT1-201ENST00000340611 SARS2Q9NP81 518 aaKnown RBP14.68□□□□□ -0.06
BRAT1-201ENST00000340611 MAT2BQ9NZL9 334 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 TMEM181Q9P2C4 612 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 MBD1Q9UIS9 605 aaPredicted RBP14.68□□□□□ -0.06
BRAT1-201ENST00000340611 OAZ3Q9UMX2 235 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 VPS13AQ96RL7 3174 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 C16orf96A6NNT2 1141 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 ZW10O43264 779 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 NIPSNAP2O75323 286 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 MT-ND1P03886 318 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 STMN1P16949 149 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 ATF4P18848 351 aaPredicted RBP14.68□□□□□ -0.06
BRAT1-201ENST00000340611 MAPK8P45983 427 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 SQLEQ14534 574 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 ZNF648Q5T619 568 aaPredicted RBP14.68□□□□□ -0.06
BRAT1-201ENST00000340611 MRNIPQ6NTE8 343 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 Q6ZVL8 140 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 HSD11B1LQ7Z5J1 315 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 METTL3Q86U44 580 aaKnown RBP14.68□□□□□ -0.06
BRAT1-201ENST00000340611 SLC51BQ86UW2 128 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 OR13F1Q8NGS4 319 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 SUSD6Q92537 303 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 DACT3Q96B18 629 aaPredicted RBP14.68□□□□□ -0.06
BRAT1-201ENST00000340611 ASB8Q9H765 288 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 IFT80Q9P2H3 777 aaPredicted RBP14.68□□□□□ -0.06
BRAT1-201ENST00000340611 GIMAP2Q9UG22 337 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 MAU2Q9Y6X3 613 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 LRRK1Q38SD2 2015 aa14.68□□□□□ -0.06
BRAT1-201ENST00000340611 C1SP09871 688 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 MYF6P23409 242 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 OXTRP30559 389 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 RAB10P61026 200 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 TFF2Q03403 129 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 EIF2B5Q13144 721 aaKnown RBP14.67□□□□□ -0.06
BRAT1-201ENST00000340611 CAPRIN1Q14444 709 aaKnown RBP14.67□□□□□ -0.06
BRAT1-201ENST00000340611 PON2Q15165 354 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 HNRNPA1L2Q32P51 320 aaKnown RBP14.67□□□□□ -0.06
BRAT1-201ENST00000340611 AFTPHQ6ULP2 937 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 WDR87Q6ZQQ6 2873 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 RETREG3Q86VR2 466 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 ZNF557Q8N988 423 aaPredicted RBP14.67□□□□□ -0.06
BRAT1-201ENST00000340611 WFIKKN2Q8TEU8 576 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 ARRDC3Q96B67 414 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 FAM129BQ96TA1 746 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 ADNPQ9H2P0 1102 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 KCNK12Q9HB15 430 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 AKIP1Q9NQ31 210 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 PAQR5Q9NXK6 330 aaPredicted RBP14.67□□□□□ -0.06
BRAT1-201ENST00000340611 PTBP2Q9UKA9 531 aaKnown RBP14.67□□□□□ -0.06
BRAT1-201ENST00000340611 AXIN1O15169 862 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 NDUFS3O75489 264 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 SRPRAP08240 638 aaKnown RBP14.67□□□□□ -0.06
BRAT1-201ENST00000340611 SLC12A2P55011 1212 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 TMBIM6P55061 237 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 MAPRE2Q15555 327 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 DESI1Q6ICB0 168 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 TUBA3EQ6PEY2 450 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 USP45Q70EL2 814 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 MINDY2Q8NBR6 621 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 DACH2Q96NX9 599 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 TMEM245Q9H330 911 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 VWA7Q9Y334 891 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 PMF1-BGLAPU3KQ54 211 aa14.67□□□□□ -0.06
BRAT1-201ENST00000340611 KNL1Q8NG31 2342 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms