RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 SEC16AO15027 2179 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 OR2A25A4D2G3 310 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 B8ZZF3 427 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 C8GP07360 202 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 FDXRP22570 491 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 GCGRP47871 477 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 PGGT1BP53609 377 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 VSX2P58304 361 aaPredicted RBP14□□□□□ -0.17
ERCC1-203ENST00000340192 MGAT5Q09328 741 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 PDAP1Q13442 181 aaKnown RBP14□□□□□ -0.17
ERCC1-203ENST00000340192 SLC9A5Q14940 896 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 NAA25Q14CX7 972 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 TCTE1Q5JU00 501 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 HECTD2Q5U5R9 776 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 ICE2Q659A1 982 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 FRMPD2BQ6IN97 320 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 CAPN12Q6ZSI9 719 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 TTLL10Q6ZVT0 673 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 MYO1HQ8N1T3 1032 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 THAP4Q8WY91 577 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 LINGO1Q96FE5 620 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 ZNF285Q96NJ3 590 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 OLFM1Q99784 485 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 ABCF3Q9NUQ8 709 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 MOCS1Q9NZB8 636 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 TAC3Q9UHF0 121 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 VWA7Q9Y334 891 aa14□□□□□ -0.17
ERCC1-203ENST00000340192 UTP11Q9Y3A2 253 aaKnown RBP14□□□□□ -0.17
ERCC1-203ENST00000340192 MDC1Q14676 2089 aaKnown RBP14□□□□□ -0.17
ERCC1-203ENST00000340192 ZNF462Q96JM2 2506 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 LOC105369274A0A096LPK9 316 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 IGKV1-8A0A0C4DH67 115 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 LOC102723532A0A0G2JNH3 316 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 A0A0J9YVX5 310 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 SRPX2O60687 465 aaPredicted RBP13.99□□□□□ -0.17
ERCC1-203ENST00000340192 KLF7O75840 302 aaPredicted RBP13.99□□□□□ -0.17
ERCC1-203ENST00000340192 TSPAN12O95859 305 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 ALAS2P22557 587 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 IMPA1P29218 277 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 PMS2P54278 862 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 ARSFP54793 590 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 IL2P60568 153 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 PRDX1Q06830 199 aaKnown RBP13.99□□□□□ -0.17
ERCC1-203ENST00000340192 SP140Q13342 867 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 GRM7Q14831 915 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 NKAIN1Q4KMZ8 207 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 MLIPQ5VWP3 458 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 FAM45BPQ6NSW5 357 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 RNF44Q7L0R7 432 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 STRA8Q7Z7C7 330 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 SLC26A11Q86WA9 606 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 PALM2Q8IXS6 379 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 LRRC56Q8IYG6 542 aaPredicted RBP13.99□□□□□ -0.17
ERCC1-203ENST00000340192 OR4N4Q8N0Y3 316 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 C9orf43Q8TAL5 461 aaPredicted RBP13.99□□□□□ -0.17
ERCC1-203ENST00000340192 FAM45AQ8TCE6 357 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 MCOLN3Q8TDD5 553 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 ADAMTS17Q8TE56 1095 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 PYROXD1Q8WU10 500 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 ABHD17AQ96GS6 310 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 ZFYVE21Q9BQ24 234 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 C17orf62Q9BQA9 187 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 PLCD4Q9BRC7 762 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 DHRS4Q9BTZ2 278 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 RAB17Q9H0T7 212 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 PARVBQ9HBI1 364 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 SAYSD1Q9NPB0 183 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 ENAMQ9NRM1 1142 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 CUTCQ9NTM9 273 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 IFT80Q9P2H3 777 aaPredicted RBP13.99□□□□□ -0.17
ERCC1-203ENST00000340192 ANKMY1Q9P2S6 941 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 NDOR1Q9UHB4 597 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 GPN3Q9UHW5 284 aaPredicted RBP13.99□□□□□ -0.17
ERCC1-203ENST00000340192 PDE10AQ9Y233 779 aa13.99□□□□□ -0.17
ERCC1-203ENST00000340192 TLN1Q9Y490 2541 aaKnown RBP13.99□□□□□ -0.17
ERCC1-203ENST00000340192 PCSK5Q92824 1860 aa13.98□□□□□ -0.17
ERCC1-203ENST00000340192 A0A1B0GX78 115 aa13.98□□□□□ -0.17
ERCC1-203ENST00000340192 FITM1A5D6W6 292 aa13.98□□□□□ -0.17
ERCC1-203ENST00000340192 SLC16A5O15375 505 aa13.98□□□□□ -0.17
ERCC1-203ENST00000340192 CCNDBP1O95273 360 aa13.98□□□□□ -0.17
ERCC1-203ENST00000340192 ITGAXP20702 1163 aa13.98□□□□□ -0.17
ERCC1-203ENST00000340192 CKAP4Q07065 602 aaKnown RBP13.98□□□□□ -0.17
ERCC1-203ENST00000340192 TRADDQ15628 312 aa13.98□□□□□ -0.17
ERCC1-203ENST00000340192 PHKG1Q16816 387 aa13.98□□□□□ -0.17
ERCC1-203ENST00000340192 WASHC2DQ5SRD0 308 aa13.98□□□□□ -0.17
ERCC1-203ENST00000340192 THEMIS2Q5TEJ8 643 aa13.98□□□□□ -0.17
ERCC1-203ENST00000340192 FBXO42Q6P3S6 717 aa13.98□□□□□ -0.17
ERCC1-203ENST00000340192 MBOAT1Q6ZNC8 495 aa13.98□□□□□ -0.17
ERCC1-203ENST00000340192 ZC3HC1Q86WB0 502 aaKnown RBP13.98□□□□□ -0.17
ERCC1-203ENST00000340192 PAQR7Q86WK9 346 aa13.98□□□□□ -0.17
ERCC1-203ENST00000340192 TTC29Q8NA56 475 aaPredicted RBP13.98□□□□□ -0.17
ERCC1-203ENST00000340192 CCDC138Q96M89 665 aa13.98□□□□□ -0.17
ERCC1-203ENST00000340192 ZNF71Q9NQZ8 489 aaPredicted RBP13.98□□□□□ -0.17
ERCC1-203ENST00000340192 STOX2Q9P2F5 926 aaPredicted RBP13.98□□□□□ -0.17
ERCC1-203ENST00000340192 CDC23Q9UJX2 597 aa13.98□□□□□ -0.17
ERCC1-203ENST00000340192 PADI2Q9Y2J8 665 aa13.98□□□□□ -0.17
ERCC1-203ENST00000340192 FASNP49327 2511 aaKnown RBP13.97□□□□□ -0.17
ERCC1-203ENST00000340192 DSCR3O14972 297 aa13.97□□□□□ -0.17
ERCC1-203ENST00000340192 EIF3HO15372 352 aaKnown RBP eCLIP13.97□□□□□ -0.17
ERCC1-203ENST00000340192 CNOT3O75175 753 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms