RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 GABARAPL1Q9H0R8 117 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 ABCG8Q9H221 673 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 IL1RAPQ9NPH3 570 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 AASDHPPTQ9NRN7 309 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 THG1LQ9NWX6 298 aaKnown RBP14.93□□□□□ -0.02
BRCC3-201ENST00000330045 ZDHHC3Q9NYG2 299 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 ABCG2Q9UNQ0 655 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 TMED5Q9Y3A6 229 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 NPIPB15A6NHN6 443 aaPredicted RBP14.93□□□□□ -0.02
BRCC3-201ENST00000330045 GFRA2O00451 464 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 AXIN1O15169 862 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 MAN1A2O60476 641 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 FSHRP23945 695 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 FMO3P31513 532 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 IDUAP35475 653 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 PPP3CCP48454 512 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 CSNK1DP48730 415 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 DAPP51397 102 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 ZNF846Q147U1 533 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 VEPH1Q14D04 833 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 EGFLAMQ63HQ2 1017 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 NIPAL1Q6NVV3 410 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 CEP68Q76N32 757 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 B3GNT8Q7Z7M8 397 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 SERPINA11Q86U17 422 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 SLC22A15Q8IZD6 547 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 ELMOD1Q8N336 334 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 ADAMTS19Q8TE59 1207 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 TOX2Q96NM4 488 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 COPS8Q99627 209 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 TM9SF3Q9HD45 589 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 SELENONQ9NZV5 590 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 KLHL42Q9P2K6 505 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 ERVK-18Q9QC07 812 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 INTS6Q9UL03 887 aaKnown RBP14.93□□□□□ -0.02
BRCC3-201ENST00000330045 TPRKBQ9Y3C4 175 aa14.93□□□□□ -0.02
BRCC3-201ENST00000330045 MYO1GB0I1T2 1018 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 GREM1O60565 184 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 ABLIM3O94929 683 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 GABARAPO95166 117 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 HIST1H2AGP0C0S8 130 aaPredicted RBP14.92□□□□□ -0.02
BRCC3-201ENST00000330045 CYP4B1P13584 511 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 HIST1H2ADP20671 130 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 ZXDBP98169 803 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 KCNC4Q03721 635 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 KEAP1Q14145 624 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 NPTX1Q15818 432 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 CRTC1Q6UUV9 634 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 TCAIMQ8N3R3 496 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 KLHL23Q8NBE8 558 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 OR7A2PQ8NGA2 310 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 SKA2Q8WVK7 121 aaPredicted RBP14.92□□□□□ -0.02
BRCC3-201ENST00000330045 HIST1H2AHQ96KK5 128 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 APOLD1Q96LR9 279 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 HIST1H2AJQ99878 128 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 BCL7BQ9BQE9 202 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 H2AFJQ9BTM1 129 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 SLC12A9Q9BXP2 914 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 HMG20AQ9NP66 347 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 IGSF6O95976 241 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 UGT2B4P06133 528 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 CLTBP09497 229 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 PCSK2P16519 638 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 JUNDP17535 347 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 AMD1P17707 334 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 SERPINA4P29622 427 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 KIR3DL1P43629 444 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 CLK3P49761 638 aaKnown RBP14.92□□□□□ -0.02
BRCC3-201ENST00000330045 PTPN5P54829 565 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 HSPA14Q0VDF9 509 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 BOP1Q14137 746 aaKnown RBP14.92□□□□□ -0.02
BRCC3-201ENST00000330045 PTCHD3Q3KNS1 767 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 SPOUT1Q5T280 376 aaKnown RBP14.92□□□□□ -0.02
BRCC3-201ENST00000330045 KDM4DQ6B0I6 523 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 CAPN13Q6MZZ7 669 aaPredicted RBP14.92□□□□□ -0.02
BRCC3-201ENST00000330045 ZCCHC8Q6NZY4 707 aaKnown RBP14.92□□□□□ -0.02
BRCC3-201ENST00000330045 MSANTD1Q6ZTZ1 278 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 TMEM150AQ86TG1 271 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 SLCO6A1Q86UG4 719 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 TRIM74Q86UV6 250 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 TRIM73Q86UV7 250 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 ARL14EPQ8N8R7 260 aaPredicted RBP14.92□□□□□ -0.02
BRCC3-201ENST00000330045 L3MBTL4Q8NA19 623 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 NELL1Q92832 810 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 PYCR2Q96C36 320 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 ASIC4Q96FT7 647 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 DUSP21Q9H596 190 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 SCN3BQ9NY72 215 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 AASSQ9UDR5 926 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 HSPE1-MOB4S4R3N1 261 aa14.92□□□□□ -0.02
BRCC3-201ENST00000330045 CLIC1O00299 241 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 SLC22A1O15245 554 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 DNAJA1P31689 397 aaKnown RBP14.91□□□□□ -0.02
BRCC3-201ENST00000330045 SLC35A2P78381 396 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 B4GALNT1Q00973 533 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 ATP13A5Q4VNC0 1218 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 Q6ZNB5 142 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 DNAJB7Q7Z6W7 309 aaPredicted RBP14.91□□□□□ -0.02
BRCC3-201ENST00000330045 ZBTB8BQ8NAP8 495 aaPredicted RBP14.91□□□□□ -0.02
BRCC3-201ENST00000330045 IGSF21Q96ID5 467 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms