RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 CBLBQ13191 982 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 TP53BP2Q13625 1128 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 SLC14A2Q15849 920 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 OR2T5Q6IEZ7 315 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 NOXRED1Q6NXP6 359 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 CRTC1Q6UUV9 634 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 Q6ZPB1 254 aaPredicted RBP15.46■□□□□ 0.06
SMAD6-201ENST00000288840 CHST9Q7L1S5 443 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 FAM9CQ8IZT9 166 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 GLB1L3Q8NCI6 653 aaPredicted RBP15.46■□□□□ 0.06
SMAD6-201ENST00000288840 OR2T29Q8NH02 315 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 HSH2DQ96JZ2 352 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 COX4I2Q96KJ9 171 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 HTATIP2Q9BUP3 242 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 VPS29Q9UBQ0 182 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 ACSL6Q9UKU0 697 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 TSC22D4Q9Y3Q8 395 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 WNT6Q9Y6F9 365 aa15.46■□□□□ 0.06
SMAD6-201ENST00000288840 H3BM21 787 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 RGS10O43665 173 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 ERN1O75460 977 aaKnown RBP15.45■□□□□ 0.06
SMAD6-201ENST00000288840 JAK1P23458 1154 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 CCR7P32248 378 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 DCTP40126 519 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 MAPK8P45983 427 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 PLA2G16P53816 162 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 DEFB115Q30KQ5 88 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 INO80DQ53TQ3 878 aaPredicted RBP15.45■□□□□ 0.06
SMAD6-201ENST00000288840 DGKKQ5KSL6 1271 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 TPRG1Q6ZUI0 275 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 P2RY8Q86VZ1 359 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 TMEM25Q86YD3 366 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 RAB2BQ8WUD1 216 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 DPF3Q92784 378 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 ACDQ96AP0 544 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 CAPNS2Q96L46 248 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 ABCD2Q9UBJ2 740 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 OARD1Q9Y530 152 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 PAPPA2Q9BXP8 1791 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 NINQ8N4C6 2090 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 ARID1BQ8NFD5 2236 aaPredicted RBP15.45■□□□□ 0.06
SMAD6-201ENST00000288840 PENKP01210 267 aaPredicted RBP15.45■□□□□ 0.06
SMAD6-201ENST00000288840 RFX3P48380 749 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 ARHGEF6Q15052 776 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 PHYKPLQ8IUZ5 450 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 MFSD2AQ8NA29 543 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 POC5Q8NA72 575 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 MCFD2Q8NI22 146 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 OTUB1Q96FW1 271 aaPredicted RBP15.45■□□□□ 0.06
SMAD6-201ENST00000288840 VPS35Q96QK1 796 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 TPT1P8Q9HAU6 139 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 PDFQ9HBH1 243 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 LHX3Q9UBR4 397 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 PTBP2Q9UKA9 531 aaKnown RBP15.45■□□□□ 0.06
SMAD6-201ENST00000288840 BRCA2P51587 3418 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 ZNF99A8MXY4 864 aaPredicted RBP15.45■□□□□ 0.06
SMAD6-201ENST00000288840 CYP7B1O75881 506 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 PCDH8O95206 1070 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 NOGQ13253 232 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 MYBPC3Q14896 1274 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 TNFAIP8L2Q6P589 184 aaPredicted RBP15.45■□□□□ 0.06
SMAD6-201ENST00000288840 ZNF683Q8IZ20 524 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 HPS1Q92902 700 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 PLAGL1Q9UM63 463 aa15.45■□□□□ 0.06
SMAD6-201ENST00000288840 H0YJX3 145 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 TNFRSF11BO00300 401 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 TAPBPO15533 448 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 TSPAN12O95859 305 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 ATP1B2P14415 290 aaPredicted RBP15.44■□□□□ 0.06
SMAD6-201ENST00000288840 HPCAL1P37235 193 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 CTSKP43235 329 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 GPR1P46091 355 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 HTRA3P83110 453 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.44■□□□□ 0.06
SMAD6-201ENST00000288840 RRM2BQ7LG56 351 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 CENPSQ8N2Z9 138 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 TSPEARQ8WU66 669 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 PHF24Q9UPV7 400 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 TEX28O15482 410 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 CNOT3O75175 753 aaKnown RBP15.44■□□□□ 0.06
SMAD6-201ENST00000288840 POP4O95707 220 aaKnown RBP15.44■□□□□ 0.06
SMAD6-201ENST00000288840 LAMP1P11279 417 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 RRM2P31350 389 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 NCS1P62166 190 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 DLEU7Q6UYE1 221 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 VRK3Q8IV63 474 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 LILRA3Q8N6C8 439 aaPredicted RBP15.44■□□□□ 0.06
SMAD6-201ENST00000288840 PHF10Q8WUB8 498 aaKnown RBP15.44■□□□□ 0.06
SMAD6-201ENST00000288840 ZNF334Q9HCZ1 680 aaPredicted RBP15.44■□□□□ 0.06
SMAD6-201ENST00000288840 HCFC1R1Q9NWW0 138 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 SARDHQ9UL12 918 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 ITM2BQ9Y287 266 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 PSME4Q14997 1843 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 ZFC3H1O60293 1989 aaKnown RBP15.44■□□□□ 0.06
SMAD6-201ENST00000288840 KPNA4O00629 521 aaPredicted RBP15.44■□□□□ 0.06
SMAD6-201ENST00000288840 RFPL2O75678 378 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 PRPS2P11908 318 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 CD36P16671 472 aa15.44■□□□□ 0.06
SMAD6-201ENST00000288840 SKIV2LQ15477 1246 aaKnown RBP15.44■□□□□ 0.06
SMAD6-201ENST00000288840 LYPLAL1Q5VWZ2 237 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms