RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 MAP3K13O43283 966 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 GALK1P51570 392 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 FCHO2Q0JRZ9 810 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 WSCD2Q2TBF2 565 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 IER5LQ5T953 404 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 CES5AQ6NT32 575 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 NEK10Q6ZWH5 1172 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 CHST15Q7LFX5 561 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-201ENST00000279247 ADGRG5Q8IZF4 528 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 C10orf111Q8N326 155 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 HCAR2Q8TDS4 363 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 ATL1Q8WXF7 558 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 HIC2Q96JB3 615 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 NSMCE2Q96MF7 247 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 CCM2LQ9NUG4 571 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-201ENST00000279247 CLEC1BQ9P126 229 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 NFKBIL1Q9UBC1 381 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-201ENST00000279247 INVSQ9Y283 1065 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 KCNE2Q9Y6J6 123 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 H3BQ06 376 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-201ENST00000279247 LILRB5O75023 590 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 CPSF4O95639 269 aaKnown RBP17.37■□□□□ 0.37
CAPN1-201ENST00000279247 MYCLP1P12525 358 aaPredicted RBP17.37■□□□□ 0.37
CAPN1-201ENST00000279247 AMD1P17707 334 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 CDKL4Q5MAI5 379 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 LCN8Q6JVE9 175 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 ANKRD54Q6NXT1 300 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 CBR4Q8N4T8 237 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 C1orf52Q8N6N3 182 aaKnown RBP17.37■□□□□ 0.37
CAPN1-201ENST00000279247 ZNF740Q8NDX6 193 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 OR2T12Q8NG77 320 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 BIRC7Q96CA5 298 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 VPS50Q96JG6 964 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 DZANK1Q9NVP4 752 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 VPS29Q9UBQ0 182 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 PCDHB14Q9Y5E9 798 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 PCM1Q15154 2024 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 SDK1Q7Z5N4 2213 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 C15orf38-AP3S2A0A0A6YYH1 394 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 POU2F2P09086 479 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 LAMP2P13473 410 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 GRIA2P42262 883 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 TAS2R38P59533 333 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 CYP4F3Q08477 520 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 PPP1R8Q12972 351 aaKnown RBP17.37■□□□□ 0.37
CAPN1-201ENST00000279247 ITPRIPL2Q3MIP1 535 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 METTL2BQ6P1Q9 378 aaKnown RBP17.37■□□□□ 0.37
CAPN1-201ENST00000279247 ARPINQ7Z6K5 226 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 MSRB3Q8IXL7 192 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 CLEC4FQ8N1N0 589 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 DPP10Q8N608 796 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 HUS1BQ8NHY5 278 aa17.37■□□□□ 0.37
CAPN1-201ENST00000279247 GNG14A0A1W2PPG7 69 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 TGFB1P01137 390 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 IL6P05231 212 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 ZNF26P17031 533 aaPredicted RBP17.36■□□□□ 0.37
CAPN1-201ENST00000279247 CASP9P55211 416 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 EEFSECP57772 596 aaKnown RBP17.36■□□□□ 0.37
CAPN1-201ENST00000279247 RPS13P62277 151 aaKnown RBP17.36■□□□□ 0.37
CAPN1-201ENST00000279247 PRKCQQ04759 706 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 NLRP8Q86W28 1048 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 FAM86B1Q8N7N1 296 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 OR14C36Q8NHC7 312 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 ZUFSPQ96AP4 578 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 MIEF2Q96C03 454 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 CMTM7Q96FZ5 175 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 YIPF3Q9GZM5 350 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 MKRN2Q9H000 416 aaKnown RBP17.36■□□□□ 0.37
CAPN1-201ENST00000279247 ANAPC2Q9UJX6 822 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 OAZ3Q9UMX2 235 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 AQP12BA6NM10 295 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 GMNNO75496 209 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 PGM3O95394 542 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 FASP25445 335 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 HKDC1Q2TB90 917 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 FAM46CQ5VWP2 391 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 ERMP1Q7Z2K6 904 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 GPR180Q86V85 440 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 AQP12AQ8IXF9 295 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 CATSPER1Q8NEC5 780 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 OR7G3Q8NG95 312 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 ZNF583Q96ND8 569 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 LIMD1Q9UGP4 676 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 NEUROG3Q9Y4Z2 214 aa17.36■□□□□ 0.37
CAPN1-201ENST00000279247 COX7A2P14406 83 aa17.35■□□□□ 0.37
CAPN1-201ENST00000279247 ATP6V1B1P15313 513 aa17.35■□□□□ 0.37
CAPN1-201ENST00000279247 PYCR3Q53H96 274 aa17.35■□□□□ 0.37
CAPN1-201ENST00000279247 TMEM31Q5JXX7 168 aa17.35■□□□□ 0.37
CAPN1-201ENST00000279247 CAPN13Q6MZZ7 669 aaPredicted RBP17.35■□□□□ 0.37
CAPN1-201ENST00000279247 FAM180BQ6P0A1 224 aa17.35■□□□□ 0.37
CAPN1-201ENST00000279247 PNCKQ6P2M8 343 aa17.35■□□□□ 0.37
CAPN1-201ENST00000279247 AMZ2Q86W34 360 aa17.35■□□□□ 0.37
CAPN1-201ENST00000279247 NR1H4Q96RI1 486 aaPredicted RBP17.35■□□□□ 0.37
CAPN1-201ENST00000279247 REXO4Q9GZR2 422 aaKnown RBP17.35■□□□□ 0.37
CAPN1-201ENST00000279247 SPNS1Q9H2V7 528 aa17.35■□□□□ 0.37
CAPN1-201ENST00000279247 OR51B5Q9H339 312 aa17.35■□□□□ 0.37
CAPN1-201ENST00000279247 ARNTLO00327 626 aa17.35■□□□□ 0.37
CAPN1-201ENST00000279247 LIN7AO14910 233 aaPredicted RBP17.35■□□□□ 0.37
CAPN1-201ENST00000279247 ACP5P13686 325 aa17.35■□□□□ 0.37
CAPN1-201ENST00000279247 CLDN8P56748 225 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms