RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 RCAN2Q14206 197 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 RPE65Q16518 533 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 COQ5Q5HYK3 327 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 PRAMEF14Q5SWL7 426 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 C10orf62Q5T681 223 aaPredicted RBP15.82■□□□□ 0.12
TPM1-201ENST00000267996 PRAMEF13Q5VWM6 474 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 NXPE4Q6UWF7 544 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 SUSD1Q6UWL2 747 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 FRMD1Q8N878 549 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 OR13H1Q8NG92 308 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 MAFAQ8NHW3 353 aaPredicted RBP15.82■□□□□ 0.12
TPM1-201ENST00000267996 PROKR1Q8TCW9 393 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 SLC5A11Q8WWX8 675 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 SMPDL3AQ92484 453 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 TSACCQ96A04 125 aaPredicted RBP15.82■□□□□ 0.12
TPM1-201ENST00000267996 CMTM7Q96FZ5 175 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 CAMK1GQ96NX5 476 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 HAUS8Q9BT25 410 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 EFCAB11Q9BUY7 163 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 PRDM8Q9NQV8 689 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 SPATA6Q9NWH7 488 aaPredicted RBP15.82■□□□□ 0.12
TPM1-201ENST00000267996 TRNAU1APQ9NX07 287 aaKnown RBP15.82■□□□□ 0.12
TPM1-201ENST00000267996 SLC7A8Q9UHI5 535 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 EIF3LQ9Y262 564 aaKnown RBP15.82■□□□□ 0.12
TPM1-201ENST00000267996 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.82■□□□□ 0.12
TPM1-201ENST00000267996 NDUFAF1Q9Y375 327 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 DGKBQ9Y6T7 804 aa15.82■□□□□ 0.12
TPM1-201ENST00000267996 LRP4O75096 1905 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 A0A1W2PPC4 97 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 FAM234BA2RU67 622 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 PDZK1P1A8MUH7 402 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 NR5A2O00482 541 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 SEC22BO75396 215 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 ACPPP15309 386 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 PCSK2P16519 638 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 JAK1P23458 1154 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 IL12AP29459 219 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 TBL3Q12788 808 aaKnown RBP15.81■□□□□ 0.12
TPM1-201ENST00000267996 C8orf82Q6P1X6 216 aaPredicted RBP15.81■□□□□ 0.12
TPM1-201ENST00000267996 LPCAT2Q7L5N7 544 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 TMPRSS11BQ86T26 416 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 LAS2Q8IYD9 372 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 SLC22A18ASQ8N1D0 253 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 PJA1Q8NG27 643 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 OR7G3Q8NG95 312 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 RLN3Q8WXF3 142 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 FCRL1Q96LA6 429 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 TPSD1Q9BZJ3 242 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 PCBD2Q9H0N5 130 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 PCED1AQ9H1Q7 454 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 RASSF4Q9H2L5 321 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 WDR41Q9HAD4 459 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 BRF2Q9HAW0 419 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 IMP3Q9NV31 184 aaKnown RBP15.81■□□□□ 0.12
TPM1-201ENST00000267996 TBC1D29Q9UFV1 150 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 POLR3HQ9Y535 204 aaPredicted RBP15.81■□□□□ 0.12
TPM1-201ENST00000267996 PCM1Q15154 2024 aa15.81■□□□□ 0.12
TPM1-201ENST00000267996 A0A1W2PPV9 198 aa15.8■□□□□ 0.12
TPM1-201ENST00000267996 MRASO14807 208 aa15.8■□□□□ 0.12
TPM1-201ENST00000267996 ATP6V1G2O95670 118 aa15.8■□□□□ 0.12
TPM1-201ENST00000267996 MTHFD1P11586 935 aaKnown RBP15.8■□□□□ 0.12
TPM1-201ENST00000267996 RPS9P46781 194 aaKnown RBP15.8■□□□□ 0.12
TPM1-201ENST00000267996 MTTPP55157 894 aa15.8■□□□□ 0.12
TPM1-201ENST00000267996 MMEL1Q495T6 779 aa15.8■□□□□ 0.12
TPM1-201ENST00000267996 CATSPEREQ5SY80 951 aa15.8■□□□□ 0.12
TPM1-201ENST00000267996 MED27Q6P2C8 311 aa15.8■□□□□ 0.12
TPM1-201ENST00000267996 RETREG3Q86VR2 466 aa15.8■□□□□ 0.12
TPM1-201ENST00000267996 FAM160A2Q8N612 972 aaPredicted RBP15.8■□□□□ 0.12
TPM1-201ENST00000267996 FAM174AQ8TBP5 190 aa15.8■□□□□ 0.12
TPM1-201ENST00000267996 SPDL1Q96EA4 605 aa15.8■□□□□ 0.12
TPM1-201ENST00000267996 METTL2AQ96IZ6 378 aaKnown RBP15.8■□□□□ 0.12
TPM1-201ENST00000267996 NRTNQ99748 197 aa15.8■□□□□ 0.12
TPM1-201ENST00000267996 GEMIN8Q9NWZ8 242 aaKnown RBP15.8■□□□□ 0.12
TPM1-201ENST00000267996 SCHIP1Q9P0W5 487 aaPredicted RBP15.8■□□□□ 0.12
TPM1-201ENST00000267996 TMED5Q9Y3A6 229 aa15.8■□□□□ 0.12
TPM1-201ENST00000267996 TSC22D4Q9Y3Q8 395 aa15.8■□□□□ 0.12
TPM1-201ENST00000267996 HEBP2Q9Y5Z4 205 aa15.8■□□□□ 0.12
TPM1-201ENST00000267996 A0A1W2PP18 115 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 DYTNA2CJ06 578 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 A6NCN8 305 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 OR52A4PA6NMU1 304 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 SCAMP1O15126 338 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 PKLRP30613 574 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 RAB28P51157 221 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 POLR2JP52435 117 aaKnown RBP15.79■□□□□ 0.12
TPM1-201ENST00000267996 LAPTM5Q13571 262 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 TSTA3Q13630 321 aaPredicted RBP15.79■□□□□ 0.12
TPM1-201ENST00000267996 SLBPQ14493 270 aaKnown RBP eCLIP15.79■□□□□ 0.12
TPM1-201ENST00000267996 VPS26BQ4G0F5 336 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 USP39Q53GS9 565 aaKnown RBP15.79■□□□□ 0.12
TPM1-201ENST00000267996 PAGE2BQ5JRK9 111 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 NET1Q7Z628 596 aaPredicted RBP15.79■□□□□ 0.12
TPM1-201ENST00000267996 FAM129CQ86XR2 697 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 FBXW8Q8N3Y1 598 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 RAB42Q8N4Z0 105 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 CAMKK1Q8N5S9 505 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 LINC01555Q8NAE3 123 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 PCYOX1LQ8NBM8 494 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 OR2L8Q8NGY9 312 aa15.79■□□□□ 0.12
TPM1-201ENST00000267996 WDR60Q8WVS4 1066 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms