RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 EPHA6Q9UF33 1036 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 RNF112Q9ULX5 631 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 PADI4Q9UM07 663 aa6.52□□□□□ -1.37
UPF3B-205ENST00000636792 MN1Q10571 1320 aaPredicted RBP6.51□□□□□ -1.37
UPF3B-205ENST00000636792 OR52A4PA6NMU1 304 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 TMEM229AB2RXF0 380 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 STX16-NPEPL1H3BU86 382 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 TRIM38O00635 465 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 STX16O14662 325 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 SLC30A4O14863 429 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 SIGLEC6O43699 453 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 TYROBPO43914 113 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 CBFA2T3O75081 653 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 SMIM24O75264 130 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 KATNA1O75449 491 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 LDOC1O95751 146 aaPredicted RBP6.51□□□□□ -1.37
UPF3B-205ENST00000636792 ATP5F1P24539 256 aaPredicted RBP6.51□□□□□ -1.37
UPF3B-205ENST00000636792 GSTM2P28161 218 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 CAPZBP47756 277 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 ALDH18A1P54886 795 aaKnown RBP6.51□□□□□ -1.37
UPF3B-205ENST00000636792 ABATP80404 500 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 DAB2P98082 770 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 E2F1Q01094 437 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 PRKAA1Q13131 559 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 TRA2AQ13595 282 aaKnown RBP eCLIP6.51□□□□□ -1.371e-7■■■■■ 38.2
UPF3B-205ENST00000636792 GPR18Q14330 331 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 ZNF460Q14592 562 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 SETDB1Q15047 1291 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 PLCL1Q15111 1095 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 TSNQ15631 228 aaKnown RBP6.51□□□□□ -1.37
UPF3B-205ENST00000636792 SEPT7Q16181 437 aaKnown RBP6.51□□□□□ -1.37
UPF3B-205ENST00000636792 SLC5A12Q1EHB4 618 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 C10orf62Q5T681 223 aaPredicted RBP6.51□□□□□ -1.37
UPF3B-205ENST00000636792 WDR74Q6RFH5 385 aaPredicted RBP6.51□□□□□ -1.37
UPF3B-205ENST00000636792 MICALCLQ6ZW33 695 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 LRRC70Q7Z2Q7 622 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 RAB44Q7Z6P3 723 aaPredicted RBP6.51□□□□□ -1.37
UPF3B-205ENST00000636792 EXOC3L1Q86VI1 746 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 AMIGO1Q86WK6 493 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 KMT5CQ86Y97 462 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 GPSM1Q86YR5 675 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 ARL14Q8N4G2 192 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 LILRA3Q8N6C8 439 aaPredicted RBP6.51□□□□□ -1.37
UPF3B-205ENST00000636792 EID2Q8N6I1 236 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 PNPLA1Q8N8W4 532 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 OR5AR1Q8NGP9 310 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 SETD7Q8WTS6 366 aaKnown RBP6.51□□□□□ -1.37
UPF3B-205ENST00000636792 ANKRD49Q8WVL7 239 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 SMPDL3AQ92484 453 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 NXNL1Q96CM4 212 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 CNDP2Q96KP4 475 aaKnown RBP6.51□□□□□ -1.37
UPF3B-205ENST00000636792 APOLD1Q96LR9 279 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 CAMK1GQ96NX5 476 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 GPR78Q96P69 363 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 FERD3LQ96RJ6 166 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 SLC38A3Q99624 504 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 MIPEPQ99797 713 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 HAUS8Q9BT25 410 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 HGH1Q9BTY7 390 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 TRMOQ9BU70 441 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 CAPS2Q9BXY5 557 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 PITHD1Q9GZP4 211 aaPredicted RBP6.51□□□□□ -1.37
UPF3B-205ENST00000636792 CHRNA10Q9GZZ6 450 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 CCDC177Q9NQR7 707 aaPredicted RBP6.51□□□□□ -1.37
UPF3B-205ENST00000636792 ARL15Q9NXU5 204 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 GPRC5BQ9NZH0 403 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 SCHIP1Q9P0W5 487 aaPredicted RBP6.51□□□□□ -1.37
UPF3B-205ENST00000636792 LRIT1Q9P2V4 623 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 GALPQ9UBC7 116 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 XPR1Q9UBH6 696 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 PSMD13Q9UNM6 376 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 PDE10AQ9Y233 779 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 WDR37Q9Y2I8 494 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 PLLPQ9Y342 182 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 KLK4Q9Y5K2 254 aa6.51□□□□□ -1.37
UPF3B-205ENST00000636792 COL27A1Q8IZC6 1860 aaPredicted RBP6.51□□□□□ -1.37
UPF3B-205ENST00000636792 ADAMTS20P59510 1910 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 HEATR5BQ9P2D3 2071 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 LY6G6EA0A0G2JKS1 128 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 A0A1W2PPM1 405 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 PIPSLA2A3N6 862 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 NPEPPSL1A6NEC2 478 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 C2orf74A8MZ97 194 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 TARM1B6A8C7 271 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 TMX2-CTNND1H3BSU7 103 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 BIRC5O15392 142 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 PLIN3O60664 434 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 UGDHO60701 494 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 RFPL3O75679 317 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 SASH3O75995 380 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 EML2O95834 649 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 SLC16A8O95907 504 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 C9P02748 559 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 ANKRD34CP0C6C1 535 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 MSL3P1P0C860 447 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 CEACAM1P13688 526 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 MTHFD2P13995 350 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 IMPA1P29218 277 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 ACADVLP49748 655 aa6.5□□□□□ -1.37
UPF3B-205ENST00000636792 PNLIPRP1P54315 467 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms