RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 A0A1W2PPV9 198 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 E7EQ34 232 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 SRPX2O60687 465 aaPredicted RBP13.74□□□□□ -0.21
HDDC2-209ENST00000609477 KLK3P07288 261 aaPredicted RBP13.74□□□□□ -0.21
HDDC2-209ENST00000609477 PVRP15151 417 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 ZNF28P17035 718 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 MAGP20916 626 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 HRH2P25021 359 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 RPA3P35244 121 aaPredicted RBP13.74□□□□□ -0.21
HDDC2-209ENST00000609477 GABRA4P48169 554 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 MC1RQ01726 317 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 PRDX1Q06830 199 aaKnown RBP13.74□□□□□ -0.21
HDDC2-209ENST00000609477 ZIC1Q15915 447 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 KBTBD12Q3ZCT8 623 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 YOD1Q5VVQ6 348 aaPredicted RBP13.74□□□□□ -0.21
HDDC2-209ENST00000609477 TLDC1Q6P9B6 456 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 FIGLAQ6QHK4 219 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 ZNF517Q6ZMY9 492 aaPredicted RBP13.74□□□□□ -0.21
HDDC2-209ENST00000609477 CCDC91Q7Z6B0 441 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 CTAGE3PQ8IX95 158 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 SYTL1Q8IYJ3 562 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 FBF1Q8TES7 1133 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 ATL1Q8WXF7 558 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 IFT81Q8WYA0 676 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 SLC45A3Q96JT2 553 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 CYTH2Q99418 400 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 GPR22Q99680 433 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 GPR87Q9BY21 358 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 FUT8Q9BYC5 575 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 L2HGDHQ9H9P8 463 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 FAM60AQ9NP50 221 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 LHX9Q9NQ69 397 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 CIDEBQ9UHD4 219 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 TSR3Q9UJK0 312 aaKnown RBP13.74□□□□□ -0.21
HDDC2-209ENST00000609477 KCND3Q9UK17 655 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 PDE10AQ9Y233 779 aa13.74□□□□□ -0.21
HDDC2-209ENST00000609477 CXorf49A8MYA2 514 aaPredicted RBP13.73□□□□□ -0.21
HDDC2-209ENST00000609477 C21orf140B9A014 251 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 EFSO43281 561 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 OR2B3O76000 313 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 TIAF1O95411 115 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 SYF2O95926 243 aaKnown RBP13.73□□□□□ -0.21
HDDC2-209ENST00000609477 STMN1P16949 149 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 GRIA3P42263 894 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 TAS2R39P59534 338 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 RHDQ02161 417 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 FASTKQ14296 549 aaKnown RBP13.73□□□□□ -0.21
HDDC2-209ENST00000609477 SLMAPQ14BN4 828 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 TCTE1Q5JU00 501 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 KIAA1614Q5VZ46 1190 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 TRIM73Q86UV7 250 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 LRRC56Q8IYG6 542 aaPredicted RBP13.73□□□□□ -0.21
HDDC2-209ENST00000609477 CNPY4Q8N129 248 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 C2orf73Q8N5S3 287 aaPredicted RBP13.73□□□□□ -0.21
HDDC2-209ENST00000609477 EIF1ADQ8N9N8 165 aaKnown RBP13.73□□□□□ -0.21
HDDC2-209ENST00000609477 GALNT6Q8NCL4 622 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 LSM14AQ8ND56 463 aaKnown RBP13.73□□□□□ -0.21
HDDC2-209ENST00000609477 OR1L3Q8NH93 324 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 DLG3Q92796 817 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 KLHL25Q9H0H3 589 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 GPN2Q9H9Y4 310 aaPredicted RBP13.73□□□□□ -0.21
HDDC2-209ENST00000609477 CPNE5Q9HCH3 593 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 GPAMQ9HCL2 828 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 MRPS30Q9NP92 439 aaKnown RBP13.73□□□□□ -0.21
HDDC2-209ENST00000609477 SRPK3Q9UPE1 567 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 PCDHGA6Q9Y5G7 932 aa13.73□□□□□ -0.21
HDDC2-209ENST00000609477 PTPRQQ9UMZ3 2332 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 H3BMH7 237 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 KRT37O76014 449 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 NTRK1P04629 796 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 CD63P08962 238 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 LIFP15018 202 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 IMPA1P29218 277 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 ECHS1P30084 290 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 SLC26A3P40879 764 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 ARSFP54793 590 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 CDKL1Q00532 357 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 USP10Q14694 798 aaKnown RBP13.72□□□□□ -0.21
HDDC2-209ENST00000609477 ICE2Q659A1 982 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 FCRL6Q6DN72 434 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 RHBDD2Q6NTF9 364 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 ADAMTSL2Q86TH1 951 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 TAX1BP1Q86VP1 789 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 PPM1NQ8N819 430 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 WBP1Q96G27 269 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 ZNF285Q96NJ3 590 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 MIPEPQ99797 713 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 C17orf62Q9BQA9 187 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 SLC7A5P2Q9GIP4 190 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 DERL2Q9GZP9 239 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 ACSS3Q9H6R3 686 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 ACTR5Q9H9F9 607 aaPredicted RBP13.72□□□□□ -0.21
HDDC2-209ENST00000609477 CCDC177Q9NQR7 707 aaPredicted RBP13.72□□□□□ -0.21
HDDC2-209ENST00000609477 EURLQ9NYK6 297 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 STOX2Q9P2F5 926 aaPredicted RBP13.72□□□□□ -0.21
HDDC2-209ENST00000609477 ADAMTS6Q9UKP5 1117 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 SNX7Q9UNH6 387 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 MTO1Q9Y2Z2 717 aaKnown RBP13.72□□□□□ -0.21
HDDC2-209ENST00000609477 PCDHGA4Q9Y5G9 962 aa13.72□□□□□ -0.21
HDDC2-209ENST00000609477 LOC101059948A0A1B0GTJ6 334 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms