RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CLGNO14967 610 aa20.12■□□□□ 0.81
PNKP-203ENST00000593946 LAMTOR5O43504 91 aa20.12■□□□□ 0.81
PNKP-203ENST00000593946 CBX6O95503 412 aa20.12■□□□□ 0.81
PNKP-203ENST00000593946 JUPP14923 745 aa20.12■□□□□ 0.81
PNKP-203ENST00000593946 CD22P20273 847 aa20.12■□□□□ 0.81
PNKP-203ENST00000593946 CASP2P42575 452 aa20.12■□□□□ 0.81
PNKP-203ENST00000593946 KRT33BQ14525 404 aa20.12■□□□□ 0.81
PNKP-203ENST00000593946 CPSF6Q16630 551 aaKnown RBP eCLIP20.12■□□□□ 0.81
PNKP-203ENST00000593946 XKR6Q5GH73 641 aa20.12■□□□□ 0.81
PNKP-203ENST00000593946 TUBGCP3Q96CW5 907 aa20.12■□□□□ 0.81
PNKP-203ENST00000593946 RAB11FIP5Q9BXF6 653 aa20.12■□□□□ 0.81
PNKP-203ENST00000593946 ZNF624Q9P2J8 865 aaPredicted RBP20.12■□□□□ 0.81
PNKP-203ENST00000593946 COLEC10Q9Y6Z7 277 aa20.12■□□□□ 0.81
PNKP-203ENST00000593946 DNAH14Q0VDD8 3507 aa20.12■□□□□ 0.81
PNKP-203ENST00000593946 ULK1O75385 1050 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 UNC5CO95185 931 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 KRT6AP02538 564 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 KRT6BP04259 564 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 NDUFS1P28331 727 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 PKLRP30613 574 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 KRT6CP48668 564 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 RAB28P51157 221 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 TSTA3Q13630 321 aaPredicted RBP20.11■□□□□ 0.81
PNKP-203ENST00000593946 DOC2AQ14183 400 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 PRAMEF14Q5SWL7 426 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 PRAMEF13Q5VWM6 474 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 LCTLQ6UWM7 567 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 SLCO4C1Q6ZQN7 724 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 Q6ZSR9 355 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 MAML2Q8IZL2 1156 aaPredicted RBP20.11■□□□□ 0.81
PNKP-203ENST00000593946 RAB42Q8N4Z0 105 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 LINC01555Q8NAE3 123 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 OR52E1Q8NGJ3 308 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 HMGCLL1Q8TB92 370 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 KIR3DX1Q9H7L2 352 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 FARSBQ9NSD9 589 aaKnown RBP20.11■□□□□ 0.81
PNKP-203ENST00000593946 RIC8BQ9NVN3 520 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 TAAR2Q9P1P5 351 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 APOBEC3BQ9UH17 382 aaKnown RBP20.11■□□□□ 0.81
PNKP-203ENST00000593946 SH2B3Q9UQQ2 575 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 DYRK1BQ9Y463 629 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 CACNA1EQ15878 2313 aa20.11■□□□□ 0.81
PNKP-203ENST00000593946 PRAMEF33A0A0G2JMD5 474 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 UBDO15205 165 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 CELA2BP08218 269 aaPredicted RBP20.1■□□□□ 0.81
PNKP-203ENST00000593946 JUNDP17535 347 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 HNF4AP41235 474 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 ZRSR2Q15696 482 aaKnown RBP20.1■□□□□ 0.81
PNKP-203ENST00000593946 WDR45BQ5MNZ6 344 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 GRHL2Q6ISB3 625 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 OGFOD2Q6N063 350 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 TRIM46Q7Z4K8 759 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 C1orf210Q8IVY1 113 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 SMPDL3AQ92484 453 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 WDR34Q96EX3 536 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 PTCD3Q96EY7 689 aaKnown RBP20.1■□□□□ 0.81
PNKP-203ENST00000593946 MARK4Q96L34 752 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 HBEGFQ99075 208 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 HAUS8Q9BT25 410 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 TXLNGQ9NUQ3 528 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 GIMAP2Q9UG22 337 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 G3BP2Q9UN86 482 aaKnown RBP20.1■□□□□ 0.81
PNKP-203ENST00000593946 SNX6Q9UNH7 406 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 CCL27Q9Y4X3 112 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 COPG1Q9Y678 874 aaKnown RBP20.1■□□□□ 0.81
PNKP-203ENST00000593946 CAPN7Q9Y6W3 813 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 SLC22A2O15244 555 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 ATP5HO75947 161 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 CSF2P04141 144 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 ALDOCP09972 364 aaKnown RBP20.1■□□□□ 0.81
PNKP-203ENST00000593946 CTSEP14091 401 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 NME1P15531 152 aaKnown RBP20.1■□□□□ 0.81
PNKP-203ENST00000593946 LBPP18428 481 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 ADSLP30566 484 aaPredicted RBP20.1■□□□□ 0.81
PNKP-203ENST00000593946 SLC19A1P41440 591 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 SCTRP47872 440 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 THEMIS2Q5TEJ8 643 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 IYDQ6PHW0 289 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 ARMCX6Q7L4S7 300 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 LPCAT2Q7L5N7 544 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 LONP2Q86WA8 852 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 C2orf73Q8N5S3 287 aaPredicted RBP20.1■□□□□ 0.81
PNKP-203ENST00000593946 OR2L8Q8NGY9 312 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 TUBB6Q9BUF5 446 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 LRRC61Q9BV99 259 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 EHD1Q9H4M9 534 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 MRGBPQ9NV56 204 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 ZNF490Q9ULM2 529 aaPredicted RBP20.1■□□□□ 0.81
PNKP-203ENST00000593946 ICKQ9UPZ9 632 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 TTC28Q96AY4 2481 aa20.1■□□□□ 0.81
PNKP-203ENST00000593946 PI4KAP42356 2102 aa20.09■□□□□ 0.81
PNKP-203ENST00000593946 A0A1W2PPV9 198 aa20.09■□□□□ 0.81
PNKP-203ENST00000593946 KDM1AO60341 852 aa20.09■□□□□ 0.81
PNKP-203ENST00000593946 NXPH1P58417 271 aa20.09■□□□□ 0.81
PNKP-203ENST00000593946 KLF10Q13118 480 aa20.09■□□□□ 0.81
PNKP-203ENST00000593946 PRRT3Q5FWE3 981 aa20.09■□□□□ 0.81
PNKP-203ENST00000593946 ATG9BQ674R7 924 aa20.09■□□□□ 0.81
PNKP-203ENST00000593946 TMPRSS11BQ86T26 416 aa20.09■□□□□ 0.81
PNKP-203ENST00000593946 SFRP1Q8N474 314 aa20.09■□□□□ 0.81
PNKP-203ENST00000593946 SLC5A11Q8WWX8 675 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms