RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 NLE1Q9NVX2 485 aaPredicted RBP14.39□□□□□ -0.11
SF3A2-204ENST00000589118 TFR2Q9UP52 801 aa14.39□□□□□ -0.11
SF3A2-204ENST00000589118 IQCF5A8MTL0 148 aa14.38□□□□□ -0.11
SF3A2-204ENST00000589118 KCNN4O15554 427 aa14.38□□□□□ -0.11
SF3A2-204ENST00000589118 SLC19A2O60779 497 aa14.38□□□□□ -0.11
SF3A2-204ENST00000589118 CD9P21926 228 aa14.38□□□□□ -0.11
SF3A2-204ENST00000589118 POU6F1Q14863 301 aa14.38□□□□□ -0.11
SF3A2-204ENST00000589118 CCSMST1Q4G0I0 132 aa14.38□□□□□ -0.11
SF3A2-204ENST00000589118 SYTL3Q4VX76 610 aa14.38□□□□□ -0.11
SF3A2-204ENST00000589118 NDUFAF7Q7L592 441 aa14.38□□□□□ -0.11
SF3A2-204ENST00000589118 NLRP9Q7RTR0 991 aa14.38□□□□□ -0.11
SF3A2-204ENST00000589118 TTC29Q8NA56 475 aaPredicted RBP14.38□□□□□ -0.11
SF3A2-204ENST00000589118 KRT35Q92764 455 aa14.38□□□□□ -0.11
SF3A2-204ENST00000589118 MTFMTQ96DP5 389 aaKnown RBP14.38□□□□□ -0.11
SF3A2-204ENST00000589118 HES7Q9BYE0 225 aa14.38□□□□□ -0.11
SF3A2-204ENST00000589118 ALG6Q9Y672 507 aa14.38□□□□□ -0.11
SF3A2-204ENST00000589118 HACD1B0YJ81 288 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 WFS1O76024 890 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 ESRRAP11474 423 aaPredicted RBP14.37□□□□□ -0.11
SF3A2-204ENST00000589118 CCR7P32248 378 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 RAB28P51157 221 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 OCA2Q04671 838 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 TLE4Q04727 773 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 CACNG1Q06432 222 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 SYT16Q17RD7 645 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 CCDC38Q502W7 563 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 FCRLBQ6BAA4 426 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 ITPRIPL1Q6GPH6 555 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 HIBCHQ6NVY1 386 aaPredicted RBP14.37□□□□□ -0.11
SF3A2-204ENST00000589118 XKRXQ6PP77 449 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 RPTNQ6XPR3 784 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 C3P1Q6ZMU1 363 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 CEP97Q8IW35 865 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 OR8K1Q8NGG5 319 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 ACTL9Q8TC94 416 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 ZNF285Q96NJ3 590 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 MIPEPQ99797 713 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 ABI3Q9P2A4 366 aa14.37□□□□□ -0.11
SF3A2-204ENST00000589118 ZNF282Q9UDV7 671 aaPredicted RBP14.37□□□□□ -0.11
SF3A2-204ENST00000589118 NXT1Q9UKK6 140 aaKnown RBP14.37□□□□□ -0.11
SF3A2-204ENST00000589118 AAR2Q9Y312 384 aaKnown RBP14.37□□□□□ -0.11
SF3A2-204ENST00000589118 IGHV1-45A0A0A0MS14 117 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 IGHV3-20A0A0C4DH32 117 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 MACROD2A1Z1Q3 448 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 CCDC162PA2VCL2 907 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 FITM1A5D6W6 292 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 IDSB3KWA1 339 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 FAM227AF5H4B4 570 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 H7C0S8 307 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 USP1O94782 785 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 AP2A2O94973 939 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 ZRANB2O95218 330 aaKnown RBP eCLIP14.36□□□□□ -0.11
SF3A2-204ENST00000589118 FTH1P02794 183 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 SERPINA7P05543 415 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 SSTR2P30874 369 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 SLC1A1P43005 524 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 CARSP49589 748 aaKnown RBP14.36□□□□□ -0.11
SF3A2-204ENST00000589118 EMP2P54851 167 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 SNRPNP63162 240 aaKnown RBP14.36□□□□□ -0.11
SF3A2-204ENST00000589118 HSPA14Q0VDF9 509 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 PRPSAP1Q14558 356 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 ZC3H12BQ5HYM0 836 aaKnown RBP14.36□□□□□ -0.11
SF3A2-204ENST00000589118 AADACL2Q6P093 401 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 CNSTQ6PJW8 725 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 SPNS3Q6ZMD2 512 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 BBS12Q6ZW61 710 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 NEK10Q6ZWH5 1172 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 TMTC1Q8IUR5 882 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 RHOT2Q8IXI1 618 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 KRT222Q8N1A0 295 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 RNF214Q8ND24 703 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 C10orf90Q96M02 699 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 RUVBL2Q9Y230 463 aaKnown RBP14.36□□□□□ -0.11
SF3A2-204ENST00000589118 MRPS2Q9Y399 296 aaKnown RBP14.36□□□□□ -0.11
SF3A2-204ENST00000589118 GTF3C1Q12789 2109 aa14.36□□□□□ -0.11
SF3A2-204ENST00000589118 A8MUI8 341 aa14.35□□□□□ -0.11
SF3A2-204ENST00000589118 PRAMEF2O60811 474 aa14.35□□□□□ -0.11
SF3A2-204ENST00000589118 BMP10O95393 424 aa14.35□□□□□ -0.11
SF3A2-204ENST00000589118 CLDN14O95500 239 aa14.35□□□□□ -0.11
SF3A2-204ENST00000589118 NADKO95544 446 aaPredicted RBP14.35□□□□□ -0.11
SF3A2-204ENST00000589118 METTL18O95568 372 aa14.35□□□□□ -0.11
SF3A2-204ENST00000589118 CRYABP02511 175 aaKnown RBP14.35□□□□□ -0.11
SF3A2-204ENST00000589118 FBLP22087 321 aaKnown RBP14.35□□□□□ -0.11
SF3A2-204ENST00000589118 MSNP26038 577 aaKnown RBP14.35□□□□□ -0.11
SF3A2-204ENST00000589118 FOXN2P32314 431 aa14.35□□□□□ -0.11
SF3A2-204ENST00000589118 EIF3EP60228 445 aaKnown RBP14.35□□□□□ -0.11
SF3A2-204ENST00000589118 HSF1Q00613 529 aa14.35□□□□□ -0.11
SF3A2-204ENST00000589118 ZNF33BQ06732 778 aa14.35□□□□□ -0.11
SF3A2-204ENST00000589118 SEMA3AQ14563 771 aa14.35□□□□□ -0.11
SF3A2-204ENST00000589118 PCOLCEQ15113 449 aa14.35□□□□□ -0.11
SF3A2-204ENST00000589118 FAM214AQ32MH5 1076 aa14.35□□□□□ -0.11
SF3A2-204ENST00000589118 TCTE1Q5JU00 501 aa14.35□□□□□ -0.11
SF3A2-204ENST00000589118 DARS2Q6PI48 645 aaKnown RBP14.35□□□□□ -0.11
SF3A2-204ENST00000589118 KATNAL2Q8IYT4 538 aa14.35□□□□□ -0.11
SF3A2-204ENST00000589118 RCOR2Q8IZ40 523 aa14.35□□□□□ -0.11
SF3A2-204ENST00000589118 OR2L8Q8NGY9 312 aa14.35□□□□□ -0.11
SF3A2-204ENST00000589118 DENND1AQ8TEH3 1009 aa14.35□□□□□ -0.11
SF3A2-204ENST00000589118 NHEJ1Q9H9Q4 299 aaPredicted RBP14.35□□□□□ -0.11
SF3A2-204ENST00000589118 ARNT2Q9HBZ2 717 aa14.35□□□□□ -0.11
SF3A2-204ENST00000589118 KLHL1Q9NR64 748 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms