RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 TGIF1Q15583 401 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 UAP1Q16222 522 aaPredicted RBP19.45■□□□□ 0.7
DDX39A-207ENST00000588542 ZXDCQ2QGD7 858 aaPredicted RBP19.45■□□□□ 0.7
DDX39A-207ENST00000588542 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.45■□□□□ 0.7
DDX39A-207ENST00000588542 MROH9Q5TGP6 573 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 FCRL6Q6DN72 434 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 PPP1R3BQ86XI6 285 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 SYTL1Q8IYJ3 562 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 SPATA6LQ8N4H0 392 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 OR2L3Q8NG85 312 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 KCNE4Q8WWG9 221 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 RNF31Q96EP0 1072 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 UBXN10Q96LJ8 280 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 PAFAH2Q99487 392 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 ACAT2Q9BWD1 397 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 DERL2Q9GZP9 239 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.45■□□□□ 0.7
DDX39A-207ENST00000588542 PILRAQ9UKJ1 303 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 RARRES3Q9UL19 164 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 NOVA2Q9UNW9 492 aaKnown RBP19.45■□□□□ 0.7
DDX39A-207ENST00000588542 TMEM184BQ9Y519 407 aaPredicted RBP19.45■□□□□ 0.7
DDX39A-207ENST00000588542 KLK4Q9Y5K2 254 aa19.45■□□□□ 0.7
DDX39A-207ENST00000588542 ITPR1Q14643 2758 aa19.44■□□□□ 0.7
DDX39A-207ENST00000588542 STMND1H3BQB6 276 aa19.44■□□□□ 0.7
DDX39A-207ENST00000588542 STK17BO94768 372 aa19.44■□□□□ 0.7
DDX39A-207ENST00000588542 DLGAP3O95886 979 aa19.44■□□□□ 0.7
DDX39A-207ENST00000588542 ENO2P09104 434 aaPredicted RBP19.44■□□□□ 0.7
DDX39A-207ENST00000588542 SLC35E2BP0CK96 405 aa19.44■□□□□ 0.7
DDX39A-207ENST00000588542 LIPCP11150 499 aa19.44■□□□□ 0.7
DDX39A-207ENST00000588542 GRIA3P42263 894 aa19.44■□□□□ 0.7
DDX39A-207ENST00000588542 TSNQ15631 228 aaKnown RBP19.44■□□□□ 0.7
DDX39A-207ENST00000588542 PWWP2BQ6NUJ5 590 aa19.44■□□□□ 0.7
DDX39A-207ENST00000588542 CYB5D1Q6P9G0 228 aa19.44■□□□□ 0.7
DDX39A-207ENST00000588542 FIGLAQ6QHK4 219 aa19.44■□□□□ 0.7
DDX39A-207ENST00000588542 TIPARPQ7Z3E1 657 aaKnown RBP19.44■□□□□ 0.7
DDX39A-207ENST00000588542 BPHLQ86WA6 291 aaPredicted RBP19.44■□□□□ 0.7
DDX39A-207ENST00000588542 SPACA3Q8IXA5 215 aa19.44■□□□□ 0.7
DDX39A-207ENST00000588542 DNAJC22Q8N4W6 341 aa19.44■□□□□ 0.7
DDX39A-207ENST00000588542 OR1L3Q8NH93 324 aa19.44■□□□□ 0.7
DDX39A-207ENST00000588542 DPH1Q9BZG8 443 aa19.44■□□□□ 0.7
DDX39A-207ENST00000588542 UNKQ9C0B0 810 aaKnown RBP19.44■□□□□ 0.7
DDX39A-207ENST00000588542 SSUH2Q9Y2M2 353 aa19.44■□□□□ 0.7
DDX39A-207ENST00000588542 H3BMH7 237 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 RRP8O43159 456 aaKnown RBP19.43■□□□□ 0.7
DDX39A-207ENST00000588542 INHBAP08476 426 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 HIST1H2AGP0C0S8 130 aaPredicted RBP19.43■□□□□ 0.7
DDX39A-207ENST00000588542 CD1DP15813 335 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 HIST1H2ADP20671 130 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 ITPKBP27987 946 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 GCAP28676 217 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 CRABP2P29373 138 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 RPA3P35244 121 aaPredicted RBP19.43■□□□□ 0.7
DDX39A-207ENST00000588542 AP1S2P56377 157 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 VSNL1P62760 191 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 DLG1Q12959 904 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 TSTA3Q13630 321 aaPredicted RBP19.43■□□□□ 0.7
DDX39A-207ENST00000588542 SLC29A2Q14542 456 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 AGTRAPQ6RW13 159 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 OR8K5Q8NH50 307 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 DCAKDQ8WVC6 231 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.43■□□□□ 0.74e-8■■■■■ 36.3
DDX39A-207ENST00000588542 ZUFSPQ96AP4 578 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 HIST1H2AHQ96KK5 128 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 FCRL4Q96PJ5 515 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 HIST1H2AJQ99878 128 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 H2AFJQ9BTM1 129 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 SLC6A20Q9NP91 592 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 ARL15Q9NXU5 204 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 CTNNAL1Q9UBT7 734 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.43■□□□□ 0.7
DDX39A-207ENST00000588542 TAC3Q9UHF0 121 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 V9GYY5 206 aaPredicted RBP19.43■□□□□ 0.7
DDX39A-207ENST00000588542 FER1L5A0AVI2 2057 aa19.43■□□□□ 0.7
DDX39A-207ENST00000588542 IGKV1-8A0A0C4DH67 115 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 TEX51A0A1B0GUA7 166 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 TARM1B6A8C7 271 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 TMEM150CB9EJG8 249 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 POC1B-GALNT4F8VUJ3 575 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 MAP3K7O43318 606 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 NRP2O60462 931 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 ALDOAP04075 364 aaKnown RBP19.42■□□□□ 0.7
DDX39A-207ENST00000588542 CTSBP07858 339 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 CMPK1P30085 196 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 TBPL1P62380 186 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 PRDX1Q06830 199 aaKnown RBP19.42■□□□□ 0.7
DDX39A-207ENST00000588542 DEFB110Q30KQ9 67 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 ICE2Q659A1 982 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 NKD1Q969G9 470 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 FBXL8Q96CD0 374 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 DHRS4Q9BTZ2 278 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 TRIM54Q9BYV2 358 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 ULBP3Q9BZM4 244 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 ATG10Q9H0Y0 220 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 FANCEQ9HB96 536 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 SNX15Q9NRS6 342 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 INTS7Q9NVH2 962 aaKnown RBP19.42■□□□□ 0.7
DDX39A-207ENST00000588542 UTP6Q9NYH9 597 aaKnown RBP19.42■□□□□ 0.7
DDX39A-207ENST00000588542 ZNF180Q9UJW8 692 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 OARD1Q9Y530 152 aa19.42■□□□□ 0.7
DDX39A-207ENST00000588542 PTPRQQ9UMZ3 2332 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms