RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 SPSB2Q99619 263 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 CRB3Q9BUF7 120 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 MENTQ9BUN1 341 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 YIPF2Q9BWQ6 316 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 CARD6Q9BX69 1037 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 RAB11FIP5Q9BXF6 653 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 RBSNQ9H1K0 784 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 EPS8L2Q9H6S3 715 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 CHRAC1Q9NRG0 131 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 STOX2Q9P2F5 926 aaPredicted RBP13.13□□□□□ -0.31
HDAC5-208ENST00000588419 HS3ST3B1Q9Y662 390 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 CNTRLQ7Z7A1 2325 aa13.13□□□□□ -0.31
HDAC5-208ENST00000588419 CD3EAPO15446 510 aaKnown RBP13.12□□□□□ -0.31
HDAC5-208ENST00000588419 GPC4O75487 556 aa13.12□□□□□ -0.31
HDAC5-208ENST00000588419 NDUFS3O75489 264 aa13.12□□□□□ -0.31
HDAC5-208ENST00000588419 ERVK-10P10266 1014 aa13.12□□□□□ -0.31
HDAC5-208ENST00000588419 AOAHP28039 575 aa13.12□□□□□ -0.31
HDAC5-208ENST00000588419 STIP1P31948 543 aaKnown RBP13.12□□□□□ -0.31
HDAC5-208ENST00000588419 DCTP40126 519 aa13.12□□□□□ -0.31
HDAC5-208ENST00000588419 TTPAP49638 278 aa13.12□□□□□ -0.31
HDAC5-208ENST00000588419 OASLQ15646 514 aaKnown RBP13.12□□□□□ -0.31
HDAC5-208ENST00000588419 KCTD19Q17RG1 926 aaPredicted RBP13.12□□□□□ -0.31
HDAC5-208ENST00000588419 TCTE1Q5JU00 501 aa13.12□□□□□ -0.31
HDAC5-208ENST00000588419 FRMPD2BQ6IN97 320 aa13.12□□□□□ -0.31
HDAC5-208ENST00000588419 NLRP9Q7RTR0 991 aa13.12□□□□□ -0.31
HDAC5-208ENST00000588419 OTOAQ7RTW8 1153 aa13.12□□□□□ -0.31
HDAC5-208ENST00000588419 SPC24Q8NBT2 197 aa13.12□□□□□ -0.31
HDAC5-208ENST00000588419 PPP4R1Q8TF05 950 aa13.12□□□□□ -0.31
HDAC5-208ENST00000588419 MAGEB10Q96LZ2 347 aaPredicted RBP13.12□□□□□ -0.31
HDAC5-208ENST00000588419 FOPNLQ96NB1 174 aa13.12□□□□□ -0.31
HDAC5-208ENST00000588419 ACAT2Q9BWD1 397 aa13.12□□□□□ -0.31
HDAC5-208ENST00000588419 WDR54Q9H977 334 aa13.12□□□□□ -0.31
HDAC5-208ENST00000588419 MRM3Q9HC36 420 aaKnown RBP13.12□□□□□ -0.31
HDAC5-208ENST00000588419 ABCF3Q9NUQ8 709 aa13.12□□□□□ -0.31
HDAC5-208ENST00000588419 PAK5Q9P286 719 aa13.12□□□□□ -0.31
HDAC5-208ENST00000588419 ZC3H7BQ9UGR2 993 aaKnown RBP13.12□□□□□ -0.31
HDAC5-208ENST00000588419 MAP2K7O14733 419 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 FFAR3O14843 346 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 GPR42O15529 346 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 CTSVO60911 334 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 ALBP02768 609 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 GCGRP47871 477 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 OCA2Q04671 838 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 ACVR1Q04771 509 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 ZNF169Q14929 603 aaPredicted RBP13.11□□□□□ -0.31
HDAC5-208ENST00000588419 WASHC2DQ5SRD0 308 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 KIRREL2Q6UWL6 708 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 CES3Q6UWW8 571 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 SLC13A5Q86YT5 568 aaPredicted RBP13.11□□□□□ -0.31
HDAC5-208ENST00000588419 GRHL3Q8TE85 626 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 RAD51AP1Q96B01 352 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 C8orf44Q96CB5 159 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 CABS1Q96KC9 395 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 MESP1Q9BRJ9 268 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 LHPPQ9H008 270 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 ZNF160Q9HCG1 818 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 ZNF304Q9HCX3 659 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 SEMA3GQ9NS98 782 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 NXT1Q9UKK6 140 aaKnown RBP13.11□□□□□ -0.31
HDAC5-208ENST00000588419 RIMKLBQ9ULI2 386 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 GUCA1BQ9UMX6 200 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 OSGIN2Q9Y236 505 aa13.11□□□□□ -0.31
HDAC5-208ENST00000588419 SCN2AQ99250 2005 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 SCN3AQ9NY46 2000 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 PRRC2CQ9Y520 2896 aaKnown RBP13.1□□□□□ -0.31
HDAC5-208ENST00000588419 HYKKA2RU49 373 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 GOLGA8KD6RF30 607 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 GOLGA8TH3BQL2 631 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 SLCO2B1O94956 709 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 MED26O95402 600 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 C1orf105O95561 183 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 ACPPP15309 386 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 FBLP22087 321 aaKnown RBP13.1□□□□□ -0.31
HDAC5-208ENST00000588419 NMBRP28336 390 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 FMO4P31512 558 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 EEF1A2Q05639 463 aaKnown RBP13.1□□□□□ -0.31
HDAC5-208ENST00000588419 KLC1Q07866 573 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 FASTKQ14296 549 aaKnown RBP13.1□□□□□ -0.31
HDAC5-208ENST00000588419 FAM214AQ32MH5 1076 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 PCID2Q5JVF3 399 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 YOD1Q5VVQ6 348 aaPredicted RBP13.1□□□□□ -0.31
HDAC5-208ENST00000588419 FAAH2Q6GMR7 532 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 GSTA5Q7RTV2 222 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 TMEM139Q8IV31 216 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 ST6GALNAC3Q8NDV1 305 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 OR2L3Q8NG85 312 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 OR11G2Q8NGC1 345 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 MIEF2Q96C03 454 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 VPS50Q96JG6 964 aa13.1□□□□□ -0.31
HDAC5-208ENST00000588419 FRMD8P1Q9BZ68 369 aaPredicted RBP13.1□□□□□ -0.31
HDAC5-208ENST00000588419 LOC105369274A0A096LPK9 316 aa13.09□□□□□ -0.31
HDAC5-208ENST00000588419 LOC102723532A0A0G2JNH3 316 aa13.09□□□□□ -0.31
HDAC5-208ENST00000588419 NIPSNAP2O75323 286 aa13.09□□□□□ -0.31
HDAC5-208ENST00000588419 MGAT1P26572 445 aa13.09□□□□□ -0.31
HDAC5-208ENST00000588419 CMPK1P30085 196 aa13.09□□□□□ -0.31
HDAC5-208ENST00000588419 RPL22P35268 128 aaKnown RBP13.09□□□□□ -0.31
HDAC5-208ENST00000588419 SOX8P57073 446 aa13.09□□□□□ -0.31
HDAC5-208ENST00000588419 YBX1P67809 324 aaKnown RBP13.09□□□□□ -0.31
HDAC5-208ENST00000588419 ARG2P78540 354 aa13.09□□□□□ -0.31
HDAC5-208ENST00000588419 CTSL3PQ5NE16 218 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms