RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 SCYL1Q96KG9 808 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 GPR78Q96P69 363 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 IL17FQ96PD4 163 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 ZIM3Q96PE6 472 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 FCRL4Q96PJ5 515 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 TRAPPC9Q96Q05 1148 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 SMC6Q96SB8 1091 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 ATOH8Q96SQ7 321 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 MAP3K3Q99759 626 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 SGPP1Q9BX95 441 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 ASPSCR1Q9BZE9 553 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 IQCGQ9H095 443 aaKnown RBP8.75□□□□□ -1.01
CIRBP-218ENST00000588344 VIPAS39Q9H9C1 493 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 POLR1BQ9H9Y6 1135 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 FANCEQ9HB96 536 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 FBXO8Q9NRD0 319 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 MKS1Q9NXB0 559 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 GPRC5BQ9NZH0 403 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 CD274Q9NZQ7 290 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 MID2Q9UJV3 735 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 PTBP2Q9UKA9 531 aaKnown RBP8.75□□□□□ -1.01
CIRBP-218ENST00000588344 BTRCQ9Y297 605 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 MSRB2Q9Y3D2 182 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 KCNE2Q9Y6J6 123 aa8.75□□□□□ -1.01
CIRBP-218ENST00000588344 IGHV5-51A0A0C4DH38 117 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 A0A1W2PPM1 405 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 A8MU76 341 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 SUPT3HB4E1H0 165 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 COPEO14579 308 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 PLD2O14939 933 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 HYAL3O43820 417 aaPredicted RBP8.74□□□□□ -1.01
CIRBP-218ENST00000588344 SUPT3HO75486 399 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 STK16O75716 305 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 JMJD7P0C870 316 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 NPPBP16860 134 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 GNAZP19086 355 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 MPSTP25325 297 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 RBMS1P29558 406 aaKnown RBP8.74□□□□□ -1.01
CIRBP-218ENST00000588344 GRK3P35626 688 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 KCNC1P48547 511 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 PIK3CGP48736 1102 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 ALDH18A1P54886 795 aaKnown RBP8.74□□□□□ -1.01
CIRBP-218ENST00000588344 GFERP55789 205 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 NAA20P61599 178 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 IRF9Q00978 393 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 MC2RQ01718 297 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 SLC18A2Q05940 514 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 ZNF844Q08AG5 666 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 TSTA3Q13630 321 aaPredicted RBP8.74□□□□□ -1.01
CIRBP-218ENST00000588344 FASTKQ14296 549 aaKnown RBP8.74□□□□□ -1.01
CIRBP-218ENST00000588344 RTP5Q14D33 572 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 TECRLQ5HYJ1 363 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 SNAP47Q5SQN1 464 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 PRAMEF13Q5VWM6 474 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 ICE2Q659A1 982 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 FIGLAQ6QHK4 219 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 LCTLQ6UWM7 567 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 SH2D5Q6ZV89 423 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 B3GNT8Q7Z7M8 397 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 TRABD2AQ86V40 505 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 C17orf64Q86WR6 236 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 SLC22A9Q8IVM8 553 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 HOMEZQ8IX15 550 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 LRRC56Q8IYG6 542 aaPredicted RBP8.74□□□□□ -1.01
CIRBP-218ENST00000588344 D2HGDHQ8N465 521 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 C2orf73Q8N5S3 287 aaPredicted RBP8.74□□□□□ -1.01
CIRBP-218ENST00000588344 TBC1D19Q8N5T2 526 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 FLVCR1-AS1Q8TAF5 88 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 MED8Q96G25 268 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 TEFMQ96QE5 360 aaKnown RBP8.74□□□□□ -1.01
CIRBP-218ENST00000588344 ACBD3Q9H3P7 528 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 SSU72Q9NP77 194 aaKnown RBP8.74□□□□□ -1.01
CIRBP-218ENST00000588344 MRPS30Q9NP92 439 aaKnown RBP8.74□□□□□ -1.01
CIRBP-218ENST00000588344 PCMTD2Q9NV79 361 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 TMEM184CQ9NVA4 438 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 SPHK1Q9NYA1 384 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 WWOXQ9NZC7 414 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 TMEM9Q9P0T7 183 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 KLHL3Q9UH77 587 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 SERTAD3Q9UJW9 196 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 ANGPTL2Q9UKU9 493 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 WASF3Q9UPY6 502 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 LOXL2Q9Y4K0 774 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 ACTL7BQ9Y614 415 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 ARID1BQ8NFD5 2236 aaPredicted RBP8.74□□□□□ -1.01
CIRBP-218ENST00000588344 CEP250Q9BV73 2442 aa8.74□□□□□ -1.01
CIRBP-218ENST00000588344 A0A1W2PPV9 198 aa8.73□□□□□ -1.01
CIRBP-218ENST00000588344 SLC9B1P1A6NJY1 282 aa8.73□□□□□ -1.01
CIRBP-218ENST00000588344 PCNX2A6NKB5 2137 aa8.73□□□□□ -1.01
CIRBP-218ENST00000588344 STX16-NPEPL1H3BU86 382 aa8.73□□□□□ -1.01
CIRBP-218ENST00000588344 GOLGA8RI6L899 631 aa8.73□□□□□ -1.01
CIRBP-218ENST00000588344 TXNDC9O14530 226 aa8.73□□□□□ -1.01
CIRBP-218ENST00000588344 STX16O14662 325 aa8.73□□□□□ -1.01
CIRBP-218ENST00000588344 POLR1CO15160 346 aaPredicted RBP8.73□□□□□ -1.01
CIRBP-218ENST00000588344 KIF1CO43896 1103 aaKnown RBP8.73□□□□□ -1.01
CIRBP-218ENST00000588344 KLK8O60259 260 aa8.73□□□□□ -1.01
CIRBP-218ENST00000588344 SRPX2O60687 465 aaPredicted RBP8.73□□□□□ -1.01
CIRBP-218ENST00000588344 H2AFYO75367 372 aaKnown RBP8.73□□□□□ -1.01
CIRBP-218ENST00000588344 KATNA1O75449 491 aa8.73□□□□□ -1.01
CIRBP-218ENST00000588344 DXOO77932 396 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms