RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 VWCEQ96DN2 955 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 MUS81Q96NY9 551 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 VPS35Q96QK1 796 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 SPON2Q9BUD6 331 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 NPLQ9BXD5 320 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ALG2Q9H553 416 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 UCK1Q9HA47 277 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 TIMMDC1Q9NPL8 285 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.33□□□□□ -0.61e-6■□□□□ 8
CDK5RAP3-231ENST00000584063 PIAS3Q9Y6X2 628 aa11.33□□□□□ -0.6
CDK5RAP3-231ENST00000584063 VWA8A3KMH1 1905 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 PTPRDP23468 1912 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 NPEPPSL1A6NEC2 478 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 NUDT19A8MXV4 375 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 H3BMQ9 156 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 PSMD9O00233 223 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 SLC22A2O15244 555 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 IDH3BO43837 385 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 SYNCRIPO60506 623 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 MATN1P21941 496 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 SLC6A4P31645 630 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 DGKGP49619 791 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 OR4D2P58180 307 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 DNAJB13P59910 316 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 RPS24P62847 133 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 SELPLGQ14242 412 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 PDCD4Q53EL6 469 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 FBXO46Q6PJ61 603 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 NECAB2Q7Z6G3 386 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ITIH5Q86UX2 942 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 CAMK1DQ8IU85 385 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 DENND1CQ8IV53 801 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 LZTR1Q8N653 840 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 DNAJC5GQ8N7S2 189 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 CDYL2Q8N8U2 506 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 PKP4Q99569 1192 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 KCTD14Q9BQ13 255 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 DGCR6LQ9BY27 220 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ADAM19Q9H013 955 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 EPS8L2Q9H6S3 715 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 CCM2LQ9NUG4 571 aaPredicted RBP11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 TLR6Q9Y2C9 796 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 MIA3Q5JRA6 1907 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ASPDHA6ND91 283 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 OR1I1O60431 355 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 RAMP2O60895 175 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ANXA8P13928 327 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 MTHFD2P13995 350 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 CD1DP15813 335 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 KPNA2P52292 529 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 HK2P52789 917 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 WDR5P61964 334 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 HERVK_113P63132 956 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 RBBP7Q16576 425 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ANXA8L1Q5VT79 327 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ZCCHC12Q6PEW1 402 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 UTS2BQ765I0 119 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 RAB11FIP2Q7L804 512 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 KRT73Q86Y46 540 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 TMEM126BQ8IUX1 230 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 KIAA2013Q8IYS2 634 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 UMODL1-AS1Q8N2C9 162 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 FAM86B1Q8N7N1 296 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ZNF366Q8N895 744 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 MFSD2AQ8NA29 543 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 FNDC8Q8TC99 324 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 WBP2Q969T9 261 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ERVK-6Q9BXR3 956 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 OSBPL6Q9BZF3 934 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 RPF2Q9H7B2 306 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 INTS10Q9NVR2 710 aaKnown RBP11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 CORINQ9Y5Q5 1042 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 U3KQV3 271 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 PATJQ8NI35 1801 aa11.32□□□□□ -0.6
CDK5RAP3-231ENST00000584063 A0A087WXM4 84 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 MROH6A6NGR9 719 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 RSL1D1O76021 490 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 TIMP1P01033 207 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 SLC2A3P11169 496 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 RHOQP17081 205 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ITGB6P18564 788 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 UGT1A1P22309 533 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 UGT1A4P22310 534 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 PRKACGP22612 351 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ALDH4A1P30038 563 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 UGT1A3P35503 534 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 UGT1A5P35504 534 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 CLCN5P51795 746 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 LSM3P62310 102 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ZNF33BQ06732 778 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 INPP5AQ14642 412 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 LAPTM4AQ15012 233 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 MACC1Q6ZN28 852 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 LGI2Q8N0V4 545 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 DHRSXQ8N5I4 330 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 ZNF461Q8TAF7 563 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 CCDC138Q96M89 665 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 DHRS9Q9BPW9 319 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 TMEM175Q9BSA9 504 aa11.31□□□□□ -0.6
CDK5RAP3-231ENST00000584063 SMURF2Q9HAU4 748 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms