RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ZNF483Q8TF39 744 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SMPDL3AQ92484 453 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PYCR2Q96C36 320 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 APOLD1Q96LR9 279 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SGPP1Q9BX95 441 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PITPNM3Q9BZ71 974 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 TWSG1Q9GZX9 223 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 DRC3Q9H069 523 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SRMSQ9H3Y6 488 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 GSTO2Q9H4Y5 243 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CCDC134Q9H6E4 229 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 OR6C2Q9NZP2 312 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PCTPQ9UKL6 214 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PADI4Q9UM07 663 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SLC22A14Q9Y267 594 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 RNF215Q9Y6U7 377 aa15.82■□□□□ 0.12
CDK5RAP3-228ENST00000583363 A0A1W2PPV9 198 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 NUDT21O43809 227 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PRICKLE3O43900 615 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CCNT2O60583 730 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 WDR47O94967 919 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 MYF5P13349 255 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 GLB1P16278 677 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 NPPBP16860 134 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CSRP1P21291 193 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SERPINB5P36952 375 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CDH13P55290 713 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CLCQ05315 142 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 BST1Q10588 318 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SLC14A1Q13336 389 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 GTF2H2Q13888 395 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 NR0B2Q15466 257 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 TTC19Q6DKK2 380 aaPredicted RBP15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 GTF2H2CQ6P1K8 395 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 RPS27LQ71UM5 84 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 LRRC70Q7Z2Q7 622 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 THOC6Q86W42 341 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ADGRF3Q8IZF5 1079 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 TEX9Q8N6V9 391 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 LRRC8CQ8TDW0 803 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PPP4R1Q8TF05 950 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 MED8Q96G25 268 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 NSUN5Q96P11 429 aaKnown RBP15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 OR4K3Q96R72 315 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SLC38A3Q99624 504 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 TBC1D10AQ9BXI6 508 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ZBTB26Q9HCK0 441 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 DNAJC11Q9NVH1 559 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 LRIT1Q9P2V4 623 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 OPTCQ9UBM4 332 aa15.81■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PCM1Q15154 2024 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 LY6G6EA0A0G2JKS1 128 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 FAM221BA6H8Z2 402 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 LILRA5A6NI73 299 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 RHPN2P1A8MT19 583 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 TMEM114B3SHH9 223 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 BTN3A3O00478 584 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ITM2AO43736 263 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SNNO75324 88 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CCND1P24385 295 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ARRB2P32121 409 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SLC1A6P48664 564 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ABCE1P61221 599 aaKnown RBP15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 BIRC2Q13490 618 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 RCN2Q14257 317 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PLCL1Q15111 1095 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SUSD1Q6UWL2 747 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 LCTLQ6UWM7 567 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ATG14Q6ZNE5 492 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 FRMD7Q6ZUT3 714 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ZNF438Q7Z4V0 828 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 GOLGA7Q7Z5G4 137 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ZNF761Q86XN6 746 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 LSMEM2Q8N112 164 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 DEFB124Q8NES8 71 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 OR6C4Q8NGE1 309 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 MIPEPQ99797 713 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 SCNM1Q9BWG6 230 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CAPS2Q9BXY5 557 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 C20orf27Q9GZN8 174 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PCBD2Q9H0N5 130 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 ZNF395Q9H8N7 513 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CCDC177Q9NQR7 707 aaPredicted RBP15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 THAP1Q9NVV9 213 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 U3KQA8 63 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PCNX2A6NKB5 2137 aa15.8■□□□□ 0.12
CDK5RAP3-228ENST00000583363 BAHCC1Q9P281 2608 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PPP6CO00743 305 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CHRM5P08912 532 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PNLIPP16233 465 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 EPB42P16452 691 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 TSPAN8P19075 237 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 EPORP19235 508 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 GPR3P46089 330 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 CCR10P46092 362 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 PIK3CGP48736 1102 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 TBPL1P62380 186 aa15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 GALNT1Q10472 559 aaPredicted RBP15.79■□□□□ 0.12
CDK5RAP3-228ENST00000583363 NR1D2Q14995 579 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms