RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 UBAP2LQ14157 1087 aaKnown RBP9.9□□□□□ -0.82
SS18-210ENST00000578700 IRF4Q15306 451 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 TBCCQ15814 346 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 PFKFB4Q16877 469 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 ALG11Q2TAA5 492 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 TMEM52BQ4KMG9 183 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 LACTB2Q53H82 288 aaPredicted RBP9.9□□□□□ -0.82
SS18-210ENST00000578700 ARL13AQ5H913 290 aaPredicted RBP9.9□□□□□ -0.82
SS18-210ENST00000578700 ACAD11Q709F0 780 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 MTDHQ86UE4 582 aaKnown RBP9.9□□□□□ -0.82
SS18-210ENST00000578700 GKN2Q86XP6 184 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 HOMEZQ8IX15 550 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 TMEM151AQ8N4L1 468 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 CLDN19Q8N6F1 224 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 PTGR2Q8N8N7 351 aaPredicted RBP9.9□□□□□ -0.82
SS18-210ENST00000578700 TP53I13Q8NBR0 393 aaPredicted RBP9.9□□□□□ -0.82
SS18-210ENST00000578700 DDHD1Q8NEL9 900 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 OR6Y1Q8NGX8 325 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 SKA2Q8WVK7 121 aaPredicted RBP9.9□□□□□ -0.82
SS18-210ENST00000578700 ASB12Q8WXK4 309 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 VOPP1Q96AW1 172 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 ERP27Q96DN0 273 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 NUS1Q96E22 293 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 PHF21BQ96EK2 531 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 L3HYPDHQ96EM0 354 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 RMDN2Q96LZ7 410 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 VPS35Q96QK1 796 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 CMKLR1Q99788 373 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 ERVK-6Q9BXR3 956 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 PFDN4Q9NQP4 134 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 LATS2Q9NRM7 1088 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 ABCF3Q9NUQ8 709 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 NUDT4Q9NZJ9 180 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 STK38LQ9Y2H1 464 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 RRP15Q9Y3B9 282 aaKnown RBP9.9□□□□□ -0.82
SS18-210ENST00000578700 TNPO3Q9Y5L0 923 aaKnown RBP9.9□□□□□ -0.82
SS18-210ENST00000578700 RNF215Q9Y6U7 377 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 LRRK1Q38SD2 2015 aa9.9□□□□□ -0.82
SS18-210ENST00000578700 CENPEQ02224 2701 aa9.9□□□□□ -0.83
SS18-210ENST00000578700 SPTBN1Q01082 2364 aaKnown RBP9.89□□□□□ -0.83
SS18-210ENST00000578700 IGLV3-16A0A075B6K0 115 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 GOLGA8QA0A0J9YX86 632 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 GOLGA8OA6NCC3 632 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 IQCF5A8MTL0 148 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 C9orf172C9J069 976 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 GOLGA8NF8WBI6 632 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 H0YHG0 523 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 STX16-NPEPL1H3BU86 382 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 STX16O14662 325 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 HGSO14964 777 aaPredicted RBP9.89□□□□□ -0.83
SS18-210ENST00000578700 AREL1O15033 823 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 HDAC3O15379 428 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 GPR39O43194 453 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 CRCPO75575 148 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 RECQL5O94762 991 aaPredicted RBP9.89□□□□□ -0.83
SS18-210ENST00000578700 RASGRP1O95267 797 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 TNFP01375 233 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 PCCBP05166 539 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 HTR1BP28222 390 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 CCKBRP32239 447 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 ALDH18A1P54886 795 aaKnown RBP9.89□□□□□ -0.83
SS18-210ENST00000578700 SRP54P61011 504 aaKnown RBP9.89□□□□□ -0.83
SS18-210ENST00000578700 GALNT1Q10472 559 aaPredicted RBP9.89□□□□□ -0.83
SS18-210ENST00000578700 TSNQ15631 228 aaKnown RBP9.89□□□□□ -0.83
SS18-210ENST00000578700 AMZ1Q400G9 498 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 SYTL3Q4VX76 610 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 PLEKHS1Q5SXH7 462 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 HENMT1Q5T8I9 393 aaKnown RBP9.89□□□□□ -0.83
SS18-210ENST00000578700 ANKS6Q68DC2 871 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 NAPRTQ6XQN6 538 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 TECPR1Q7Z6L1 1165 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 TAF8Q7Z7C8 310 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 SFTPA2Q8IWL1 248 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 FITM2Q8N6M3 262 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 ZNF781Q8N8C0 355 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 FAM46DQ8NEK8 389 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 ASZ1Q8WWH4 475 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 SCAMP4Q969E2 229 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 GLYATL1Q969I3 302 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 PTERQ96BW5 349 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 DTD2Q96FN9 168 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 ZNF514Q96K75 400 aaPredicted RBP9.89□□□□□ -0.83
SS18-210ENST00000578700 COQ10AQ96MF6 247 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 SORT1Q99523 831 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 APOOQ9BUR5 198 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 ABCG8Q9H221 673 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 ZNF395Q9H8N7 513 aaPredicted RBP9.89□□□□□ -0.83
SS18-210ENST00000578700 SAR1AQ9NR31 198 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 MRGBPQ9NV56 204 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 PNPOQ9NVS9 261 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 GEMIN8Q9NWZ8 242 aaKnown RBP9.89□□□□□ -0.83
SS18-210ENST00000578700 KLQ9UEF7 1012 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 MOSPD1Q9UJG1 213 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 MED16Q9Y2X0 877 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 OR1A2Q9Y585 309 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 LRP4O75096 1905 aa9.89□□□□□ -0.83
SS18-210ENST00000578700 MYO9AB2RTY4 2548 aa9.88□□□□□ -0.83
SS18-210ENST00000578700 SPENQ96T58 3664 aaKnown RBP9.88□□□□□ -0.83
SS18-210ENST00000578700 ARHGEF17Q96PE2 2063 aaPredicted RBP9.88□□□□□ -0.83
SS18-210ENST00000578700 B4DGG1 531 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms