RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 CEP128Q6ZU80 1094 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 TBC1D21Q8IYX1 336 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 EID3Q8N140 333 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 GHDCQ8N2G8 530 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 TAB3Q8N5C8 712 aaPredicted RBP9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 LMNTD1Q8N9Z9 388 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 LINC01555Q8NAE3 123 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 MDS2Q8NDY4 140 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 IPMKQ8NFU5 416 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 SCMH1Q96GD3 660 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 OXNAD1Q96HP4 312 aaPredicted RBP9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 IMMP1LQ96LU5 166 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 COPS8Q99627 209 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 SELENOSQ9BQE4 189 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 ZNF700Q9H0M5 742 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 KCNJ16Q9NPI9 418 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 STOX2Q9P2F5 926 aaPredicted RBP9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 POLG2Q9UHN1 485 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 RNF6Q9Y252 685 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 PLEKHA6Q9Y2H5 1048 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 HRH3Q9Y5N1 445 aa9.92□□□□□ -0.82
CTDNEP1-202ENST00000570380 IGLV3-16A0A075B6K0 115 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 A8MUI8 341 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 CFAP99D6REC4 459 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 FFAR3O14843 346 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 PPP1R12AO14974 1030 aaPredicted RBP9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 GPR42O15529 346 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 CTAG2O75638 210 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 AP2A1O95782 977 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 CYP1A2P05177 515 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 EEF1DP29692 281 aaKnown RBP9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 TNNT3P45378 269 aaPredicted RBP9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 CDKN1CP49918 316 aaPredicted RBP9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 MEOX1P50221 254 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 VSX2P58304 361 aaPredicted RBP9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 KLHL30Q0D2K2 578 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 WASHC5Q12768 1159 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 TUBA3CQ13748 450 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 DSG2Q14126 1118 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 TAF1AQ15573 450 aaPredicted RBP9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 FCRLBQ6BAA4 426 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 PRMT9Q6P2P2 845 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 TUBA3EQ6PEY2 450 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 MICALCLQ6ZW33 695 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 CXXC5Q7LFL8 322 aaKnown RBP9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 BEST3Q8N1M1 668 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 C2orf73Q8N5S3 287 aaPredicted RBP9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 CLDN19Q8N6F1 224 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 OR5K2Q8NHB8 316 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 HEXDCQ8WVB3 486 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 ASB5Q8WWX0 329 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 HDAC10Q969S8 669 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 ULK4Q96C45 1275 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 ALPK1Q96QP1 1244 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 VPS37BQ9H9H4 285 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 TEKT2Q9UIF3 430 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 ZNF407Q9C0G0 2248 aa9.91□□□□□ -0.82
CTDNEP1-202ENST00000570380 RCCD1A6NED2 376 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 C2orf81A6NN90 581 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 CTSVO60911 334 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 PROSCO94903 275 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 AGTP01019 485 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 ICAM2P13598 275 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 FBLP22087 321 aaKnown RBP9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 CHRNB4P30926 498 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 CD96P40200 585 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 EFNA3P52797 238 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 AP2B1P63010 937 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 OR1C1Q15619 314 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 RNFT1Q5M7Z0 435 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 SPINK14Q6IE38 97 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 FRMPD2BQ6IN97 320 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 TMEM205Q6UW68 189 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 CLEC9AQ6UXN8 241 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 GALNTL5Q7Z4T8 443 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 SNX20Q7Z614 316 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 WFDC11Q8NEX6 87 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 OR13C4Q8NGS5 318 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 C18orf12Q96KH6 178 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 FCRL5Q96RD9 977 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 MENTQ9BUN1 341 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 POLDIP3Q9BY77 421 aaKnown RBP9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 LUC7LQ9NQ29 371 aaKnown RBP9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 ANKRD10Q9NXR5 420 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 ZDHHC3Q9NYG2 299 aa9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 ZC3H7BQ9UGR2 993 aaKnown RBP9.9□□□□□ -0.82
CTDNEP1-202ENST00000570380 MPDZO75970 2070 aa9.89□□□□□ -0.83
CTDNEP1-202ENST00000570380 LOC105369274A0A096LPK9 316 aa9.89□□□□□ -0.83
CTDNEP1-202ENST00000570380 LOC102723532A0A0G2JNH3 316 aa9.89□□□□□ -0.83
CTDNEP1-202ENST00000570380 LRRD1A4D1F6 860 aa9.89□□□□□ -0.83
CTDNEP1-202ENST00000570380 C3orf70A6NLC5 250 aaPredicted RBP9.89□□□□□ -0.83
CTDNEP1-202ENST00000570380 ZNF487B1APH4 448 aa9.89□□□□□ -0.83
CTDNEP1-202ENST00000570380 CCL22O00626 93 aa9.89□□□□□ -0.83
CTDNEP1-202ENST00000570380 APOL1O14791 398 aa9.89□□□□□ -0.83
CTDNEP1-202ENST00000570380 LIN7AO14910 233 aaPredicted RBP9.89□□□□□ -0.83
CTDNEP1-202ENST00000570380 MAN1A2O60476 641 aa9.89□□□□□ -0.83
CTDNEP1-202ENST00000570380 SRPX2O60687 465 aaPredicted RBP9.89□□□□□ -0.83
CTDNEP1-202ENST00000570380 HEXBP07686 556 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms