RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 KANK2Q63ZY3 851 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 MSANTD2Q6P1R3 559 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 AFTPHQ6ULP2 937 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 C11orf96Q7Z7L8 435 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 ADAMTSL2Q86TH1 951 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 LRRC17Q8N6Y2 441 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 RTL3Q8N8U3 475 aaKnown RBP10.65□□□□□ -0.71
PALB2-206ENST00000568219 IPCEF1Q8WWN9 437 aaPredicted RBP10.65□□□□□ -0.71
PALB2-206ENST00000568219 ZNF583Q96ND8 569 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 RDH12Q96NR8 316 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 MTERF1Q99551 399 aaKnown RBP10.65□□□□□ -0.71
PALB2-206ENST00000568219 MGLLQ99685 303 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 NUSAP1Q9BXS6 441 aaKnown RBP10.65□□□□□ -0.71
PALB2-206ENST00000568219 BEX1Q9HBH7 125 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 CTPS2Q9NRF8 586 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 ABCD2Q9UBJ2 740 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 USP3Q9Y6I4 520 aa10.65□□□□□ -0.71
PALB2-206ENST00000568219 LAMB1P07942 1786 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 LOC730098B7Z3J9 87 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 H0YC42 278 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 JUNBP17275 347 aaPredicted RBP10.64□□□□□ -0.71
PALB2-206ENST00000568219 MYL12AP19105 171 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 FCGRTP55899 365 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 ZXDBP98169 803 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 IRF8Q02556 426 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 NUMA1Q14980 2115 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 WSCD2Q2TBF2 565 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 GTF2IRD2BQ6EKJ0 949 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 PNCKQ6P2M8 343 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 GTF2IRD2Q86UP8 949 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 APOBEC3FQ8IUX4 373 aaKnown RBP10.64□□□□□ -0.71
PALB2-206ENST00000568219 BRSK1Q8TDC3 778 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 ASZ1Q8WWH4 475 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 RASSF5Q8WWW0 418 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 NTN4Q9HB63 628 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 KLHL1Q9NR64 748 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 ABCG2Q9UNQ0 655 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 ALS2Q96Q42 1657 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 SNTNA6NMZ2 147 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 SLC28A1O00337 649 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 ZNF197O14709 1029 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 CAPNS1P04632 268 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 INHBBP09529 407 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 IL7P13232 177 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 FPR1P21462 350 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 PKDCCQ504Y2 493 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 KLHL12Q53G59 568 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 ZNF691Q5VV52 312 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 TTC23LQ6PF05 361 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 USP30Q70CQ3 517 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 PAPD5Q8NDF8 572 aaKnown RBP10.64□□□□□ -0.71
PALB2-206ENST00000568219 OR10G2Q8NGC3 310 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 OR2T11Q8NH01 316 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 DEDD2Q8WXF8 326 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 FEVQ99581 238 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 DOK1Q99704 481 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 R3HDMLQ9H3Y0 253 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 SARDHQ9UL12 918 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 ACTL7AQ9Y615 435 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 NINQ8N4C6 2090 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.64□□□□□ -0.71
PALB2-206ENST00000568219 PLK4O00444 970 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 NUPL2O15504 423 aaKnown RBP10.64□□□□□ -0.71
PALB2-206ENST00000568219 FFAR2O15552 330 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 SCO1O75880 301 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 KCNK2O95069 426 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 SERPIND1P05546 499 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 NAT1P18440 290 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 BEX3Q00994 111 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 ZNF177Q13360 481 aaPredicted RBP10.64□□□□□ -0.71
PALB2-206ENST00000568219 ALFQ53S48 1182 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 CEP68Q76N32 757 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 GOLGA7Q7Z5G4 137 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 L3HYPDHQ96EM0 354 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 TXNDC15Q96J42 360 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 ACAT2Q9BWD1 397 aa10.64□□□□□ -0.71
PALB2-206ENST00000568219 UBA2Q9UBT2 640 aaPredicted RBP10.64□□□□□ -0.71
PALB2-206ENST00000568219 ARID1BQ8NFD5 2236 aaPredicted RBP10.63□□□□□ -0.71
PALB2-206ENST00000568219 SMLR1H3BR10 107 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 HPRP00739 348 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 FGF4P08620 206 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 PRKAR1AP10644 381 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 ENDOUP21128 410 aaKnown RBP10.63□□□□□ -0.71
PALB2-206ENST00000568219 MAPK1P28482 360 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 TALDO1P37837 337 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 SLC9A3P48764 834 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 RORCP51449 518 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 LRRC26Q2I0M4 334 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 TTLL9Q3SXZ7 439 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 CRTC2Q53ET0 693 aaPredicted RBP10.63□□□□□ -0.71
PALB2-206ENST00000568219 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.63□□□□□ -0.71
PALB2-206ENST00000568219 TUBA3EQ6PEY2 450 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 TMEM179BQ7Z7N9 219 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 CACTIN-AS1Q8N1I8 211 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 TOP6BLQ8N6T0 577 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 FCGR1BQ92637 280 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 UBXN10Q96LJ8 280 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 INPP5KQ9BT40 448 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 WACQ9BTA9 647 aa10.63□□□□□ -0.71
PALB2-206ENST00000568219 CCDC59Q9P031 241 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms