RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 PRDX3P30048 256 aaKnown RBP5.06□□□□□ -1.6
HERC1-213ENST00000561359 RFC1P35251 1148 aaPredicted RBP5.06□□□□□ -1.6
HERC1-213ENST00000561359 PRCPP42785 496 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 NSG1P42857 185 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 PTPN9P43378 593 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 RAB28P51157 221 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 PMS1P54277 932 aaKnown RBP5.06□□□□□ -1.6
HERC1-213ENST00000561359 TMPRSS15P98073 1019 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 ZNF33BQ06732 778 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 PMPCAQ10713 525 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 GTF2H3Q13889 308 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 SLC5A12Q1EHB4 618 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 RALGPS1Q5JS13 557 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 TAF3Q5VWG9 929 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 ATG9BQ674R7 924 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 TLDC1Q6P9B6 456 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 CNSTQ6PJW8 725 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 KRBA2Q6ZNG9 492 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 OVCH1Q7RTY7 1134 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 TSPYL5Q86VY4 417 aaPredicted RBP5.06□□□□□ -1.6
HERC1-213ENST00000561359 AMZ2Q86W34 360 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 PAQR7Q86WK9 346 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 RAVER1Q8IY67 606 aaKnown RBP5.06□□□□□ -1.6
HERC1-213ENST00000561359 PRSS58Q8IYP2 241 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 PGBD5Q8N414 524 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 C3orf20Q8ND61 904 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 OR10Q1Q8NGQ4 319 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 GDAP1Q8TB36 358 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 ABHD4Q8TB40 342 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 CPA5Q8WXQ8 436 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 GLYATL1Q969I3 302 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 FKBP10Q96AY3 582 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 C8orf44Q96CB5 159 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 FAM81BQ96LP2 452 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 C12orf66Q96MD2 445 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 ZNF599Q96NL3 588 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 MGME1Q9BQP7 344 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 MESP1Q9BRJ9 268 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 TRIM51Q9BSJ1 452 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 CRACR2AQ9BSW2 395 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 CRB3Q9BUF7 120 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 ASPNQ9BXN1 380 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 SRMSQ9H3Y6 488 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 KIR3DX1Q9H7L2 352 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 WDR54Q9H977 334 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 SLC22A11Q9NSA0 550 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 C19orf73Q9NVV2 129 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 TAS2R14Q9NYV8 317 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 SLC24A2Q9UI40 661 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 NXT1Q9UKK6 140 aaKnown RBP5.06□□□□□ -1.6
HERC1-213ENST00000561359 MTMR6Q9Y217 621 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 CHKBQ9Y259 395 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 PCDHB14Q9Y5E9 798 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 HCFC1P51610 2035 aa5.06□□□□□ -1.6
HERC1-213ENST00000561359 CHD3Q12873 2000 aaKnown RBP5.06□□□□□ -1.6
HERC1-213ENST00000561359 MGAM2Q2M2H8 2515 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 RGSL1A5PLK6 1076 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 TRIM64A6NGJ6 449 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 TRIM64BA6NI03 449 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 C2CD4BA6NLJ0 364 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 EEF2KO00418 725 aaKnown RBP5.05□□□□□ -1.6
HERC1-213ENST00000561359 CELA2AP08217 269 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 PFKFB1P16118 471 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 BMP7P18075 431 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 CD53P19397 219 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 EEF1DP29692 281 aaKnown RBP5.05□□□□□ -1.6
HERC1-213ENST00000561359 PBLDP30039 288 aaPredicted RBP5.05□□□□□ -1.6
HERC1-213ENST00000561359 CDH5P33151 784 aaPredicted RBP5.05□□□□□ -1.6
HERC1-213ENST00000561359 PTGS2P35354 604 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 BPIFB4P59827 614 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 APBA1Q02410 837 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 LRRC63Q05C16 580 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 ITKQ08881 620 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 NFE2L1Q14494 772 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 KHDC1Q4VXA5 237 aaKnown RBP5.05□□□□□ -1.6
HERC1-213ENST00000561359 VWA3BQ502W6 1294 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 ANKRD20A8PQ5CZ79 823 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 NAA35Q5VZE5 725 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 TXNRD3NBQ6F5E7 133 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 TRIM65Q6PJ69 517 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 TTLL10Q6ZVT0 673 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 NEK10Q6ZWH5 1172 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 NDUFAF7Q7L592 441 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 SIAH3Q8IW03 269 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 ARHGAP12Q8IWW6 846 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 CHERPQ8IWX8 916 aaKnown RBP5.05□□□□□ -1.6
HERC1-213ENST00000561359 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.05□□□□□ -1.6
HERC1-213ENST00000561359 C19orf47Q8N9M1 422 aaKnown RBP5.05□□□□□ -1.6
HERC1-213ENST00000561359 FAM98AQ8NCA5 519 aaKnown RBP5.05□□□□□ -1.6
HERC1-213ENST00000561359 LPCAT1Q8NF37 534 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 JOSD2Q8TAC2 188 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 FAM57AQ8TBR7 257 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 NSMCE1Q8WV22 266 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 LCN9Q8WX39 176 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 CENPIQ92674 756 aaPredicted RBP5.05□□□□□ -1.6
HERC1-213ENST00000561359 DLG3Q92796 817 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 TTC25Q96NG3 672 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 DIRC2Q96SL1 478 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 ZSCAN5AQ9BUG6 496 aa5.05□□□□□ -1.6
HERC1-213ENST00000561359 SGPP1Q9BX95 441 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms