RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 PTRH2Q9Y3E5 179 aaKnown RBP16.51■□□□□ 0.23
CDC42BPB-208ENST00000561271 A0A1W2PPV9 198 aa16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 MAGEB16A2A368 324 aa16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 CTSVO60911 334 aa16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 CNOT3O75175 753 aaKnown RBP16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 ITGAXP20702 1163 aa16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 FOLR3P41439 243 aa16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 PGDP52209 483 aa16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 YBX1P67809 324 aaKnown RBP16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 DCDP81605 110 aaKnown RBP16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 PTK6Q13882 451 aa16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 NKAIN1Q4KMZ8 207 aa16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 ZNF549Q6P9A3 640 aa16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 MRGPREQ86SM8 312 aa16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 MAGEC3Q8TD91 643 aa16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 CAPZA3Q96KX2 299 aa16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 C17orf62Q9BQA9 187 aa16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 SELENOSQ9BQE4 189 aa16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 ACAT2Q9BWD1 397 aa16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 CCDC68Q9H2F9 335 aa16.5■□□□□ 0.23
CDC42BPB-208ENST00000561271 MYO1CO00159 1063 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 DNALI1O14645 258 aaPredicted RBP16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 PSIP1O75475 530 aaKnown RBP16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 FKBP9O95302 570 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 ERGP11308 486 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 TSTA3Q13630 321 aaPredicted RBP16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 CRYMQ14894 314 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 CYP2A13Q16696 494 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 TTLL9Q3SXZ7 439 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 ZC3H12BQ5HYM0 836 aaKnown RBP16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 TTLL10Q6ZVT0 673 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 KCNMB4Q86W47 210 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 DTWD1Q8N5C7 304 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 METTL27Q8N6F8 245 aaPredicted RBP16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 TEX19Q8NA77 164 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 OR2A1Q8NGT9 310 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 OR9A1PQ8NGU1 263 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 DLG3Q92796 817 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 GPR21Q99679 349 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 SLC6A20Q9NP91 592 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 SLC22A11Q9NSA0 550 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 FBXO5Q9UKT4 447 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 PCDHGA9Q9Y5G4 932 aaKnown RBP16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 FAM169AQ9Y6X4 670 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 HIVEP3Q5T1R4 2406 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 SVILO95425 2214 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 RELNP78509 3460 aa16.49■□□□□ 0.23
CDC42BPB-208ENST00000561271 A0A0J9YVX5 310 aa16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 A0A1B0GX78 115 aa16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 A6NL46 340 aa16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 CATP04040 527 aaKnown RBP16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 TCP1P17987 556 aaKnown RBP16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 PGAM1P18669 254 aa16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 ALAS2P22557 587 aa16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 VSX2P58304 361 aaPredicted RBP16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 DHX9Q08211 1270 aaKnown RBP16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 IGFBP7Q16270 282 aa16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 HSP90AA5PQ58FG0 334 aa16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 FRMPD2BQ6IN97 320 aa16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 MRPL14Q6P1L8 145 aaKnown RBP16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 SUSD1Q6UWL2 747 aa16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 CPNE9Q8IYJ1 553 aa16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 OR2Y1Q8NGV0 311 aa16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 CD200R1Q8TD46 325 aa16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 CALML6Q8TD86 181 aa16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 KCNJ9Q92806 393 aa16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 FAM167BQ9BTA0 163 aa16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 FAM114A2Q9NRY5 505 aa16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 IARS2Q9NSE4 1012 aaKnown RBP16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 CUTCQ9NTM9 273 aa16.48■□□□□ 0.23
CDC42BPB-208ENST00000561271 TARM1B6A8C7 271 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 DSCR3O14972 297 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 CEACAM4O75871 244 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 HAUS5O94927 633 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 ARSFP54793 590 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 RRADP55042 308 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 RAPSNQ13702 412 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 GRM7Q14831 915 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 MSS51Q4VC12 460 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 TCTE1Q5JU00 501 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 NEK10Q6ZWH5 1172 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 COX15Q7KZN9 410 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 RNF44Q7L0R7 432 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 LMNTD2Q8IXW0 634 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 TMEM102Q8N9M5 508 aaPredicted RBP16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 TTC29Q8NA56 475 aaPredicted RBP16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 PPFIBP2Q8ND30 876 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 FDCSPQ8NFU4 85 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 SLCO2A1Q92959 643 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 ZUFSPQ96AP4 578 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 ZNF285Q96NJ3 590 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 PKP4Q99569 1192 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 NDNQ99608 321 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 DPH7Q9BTV6 452 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 NUDT9Q9BW91 350 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 PCYOX1Q9UHG3 505 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 KLK4Q9Y5K2 254 aa16.47■□□□□ 0.23
CDC42BPB-208ENST00000561271 USP9XQ93008 2570 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms