RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 SYT16Q17RD7 645 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 ELOA3BQ3SY89 546 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 NADK2Q4G0N4 442 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 VARS2Q5ST30 1063 aaKnown RBP12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 CCSAPQ6IQ19 270 aaPredicted RBP12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 SLC8B1Q6J4K2 584 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 DNM1P34Q6PK57 102 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 LRRC70Q7Z2Q7 622 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 ELOA3Q8NG57 546 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 ZCCHC10Q8TBK6 192 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 NCSTNQ92542 709 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 THRSPQ92748 146 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 HTATIP2Q9BUP3 242 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 SPATA9Q9BWV2 254 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 CHIAQ9BZP6 476 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 DPAGT1Q9H3H5 408 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 UGT1A7Q9HAW7 530 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 UGT1A10Q9HAW8 530 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 UGT1A8Q9HAW9 530 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 ADAP2Q9NPF8 381 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 TNFRSF10DQ9UBN6 386 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 RAB36O95755 333 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 CHRM5P08912 532 aaPredicted RBP12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 SPATA31D3P0C874 917 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 PGAM2P15259 253 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 FPR1P21462 350 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 FLT3LGP49771 235 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 COLEC12Q5KU26 742 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 PRPF38BQ5VTL8 546 aaKnown RBP12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 SPATA31D4Q6ZUB0 917 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 CEP68Q76N32 757 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 HERVK_113Q902F9 699 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 NKD1Q969G9 470 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 GAL3ST3Q96A11 431 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 OSBPL2Q9H1P3 480 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 EBF2Q9HAK2 575 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 AMBNQ9NP70 447 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 ZDHHC3Q9NYG2 299 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 SEC14L4Q9UDX3 406 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 SPEF1Q9Y4P9 236 aa12.92□□□□□ -0.34
CSPG4P11-201ENST00000560634 YJEFN3A6XGL0 299 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 RHPN2P1A8MT19 583 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 TPST2O60704 377 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 ZNF20P17024 532 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 CCR8P51685 355 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 SLC10A6Q3KNW5 377 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 TPRG1LQ5T0D9 272 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 ALKBH2Q6NS38 261 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 PAQR3Q6TCH7 311 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 MARCH9Q86YJ5 346 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 POF1BQ8WVV4 589 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 DPEP2Q9H4A9 486 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 SLC32A1Q9H598 525 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 MRPS30Q9NP92 439 aaKnown RBP12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 POLR3BQ9NW08 1133 aaPredicted RBP12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 COL3A1P02461 1466 aaPredicted RBP12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 IGLV3-22A0A075B6J6 115 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 IRAK2O43187 625 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 CPNE3O75131 537 aaKnown RBP12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 XRCC1P18887 633 aaPredicted RBP12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 GRIA1P42261 906 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 DGKGP49619 791 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 NCBP2P52298 156 aaKnown RBP eCLIP12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 RHDQ02161 417 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 SLC51AQ86UW1 340 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 NPAS4Q8IUM7 802 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 NR4A3Q92570 626 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 AKTIPQ9H8T0 292 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 DUS2Q9NX74 493 aaKnown RBP12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 L7N2F9 121 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 GSTT2P0CG29 244 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 MTHFD1P11586 935 aaKnown RBP12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 AOC1P19801 751 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 VAMP2P63027 116 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 PHC1P78364 1004 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 ABHD18Q0P651 414 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 MAB21L1Q13394 359 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 TRIM74Q86UV6 250 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 TRIM73Q86UV7 250 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 NXPE2Q96DL1 559 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 FZD8Q9H461 694 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 DPEP3Q9H4B8 488 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 SERINC1Q9NRX5 453 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 MTMR10Q9NXD2 777 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 ABCG2Q9UNQ0 655 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 FAM159BA6NKW6 160 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 ZNF806P0C7X5 589 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 EPCAMP16422 314 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 GADD45AP24522 165 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 KCTD19Q17RG1 926 aaPredicted RBP12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 FRG2Q64ET8 278 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 SLC22A15Q8IZD6 547 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 GHDCQ8N2G8 530 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 SPERTQ8NA61 448 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 TMBIM1Q969X1 311 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 RGMAQ96B86 450 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 FRG2BQ96QU4 278 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 IL12RB2Q99665 862 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 TRIM36Q9NQ86 728 aa12.91□□□□□ -0.34
CSPG4P11-201ENST00000560634 FZD4Q9ULV1 537 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms