RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 OR2T12Q8NG77 320 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 NDNFQ8TB73 568 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 HEPHQ9BQS7 1158 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 AARSD1Q9BTE6 412 aaKnown RBP10.81□□□□□ -0.68
LINC00661-204ENST00000549354 ACTR8Q9H981 624 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 CLEC4EQ9ULY5 219 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 PDE10AQ9Y233 779 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 PCDHGA4Q9Y5G9 962 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 M0R3G1 203 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 SAP18O00422 153 aaKnown RBP10.81□□□□□ -0.68
LINC00661-204ENST00000549354 ALPLP05186 524 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 PKMP14618 531 aaKnown RBP10.81□□□□□ -0.68
LINC00661-204ENST00000549354 LPOP22079 712 aaPredicted RBP10.81□□□□□ -0.68
LINC00661-204ENST00000549354 JAK1P23458 1154 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 CRHBPP24387 322 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 EPHA2P29317 976 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 TP53BP2Q13625 1128 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 PDE12Q6L8Q7 609 aaKnown RBP10.81□□□□□ -0.68
LINC00661-204ENST00000549354 RPL3LQ92901 407 aaKnown RBP10.81□□□□□ -0.68
LINC00661-204ENST00000549354 ISG20Q96AZ6 181 aaKnown RBP10.81□□□□□ -0.68
LINC00661-204ENST00000549354 MTERF1Q99551 399 aaKnown RBP10.81□□□□□ -0.68
LINC00661-204ENST00000549354 CGREF1Q99674 301 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 ALOXE3Q9BYJ1 711 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 MAGEE1Q9HCI5 957 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 SLC52A3Q9NQ40 469 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 HCFC1R1Q9NWW0 138 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 INTS6Q9UL03 887 aaKnown RBP10.81□□□□□ -0.68
LINC00661-204ENST00000549354 MED16Q9Y2X0 877 aa10.81□□□□□ -0.68
LINC00661-204ENST00000549354 CACNA1IQ9P0X4 2223 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 PNMA8CA0A1B0GUJ8 204 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.8□□□□□ -0.68
LINC00661-204ENST00000549354 SMAD6O43541 496 aaKnown RBP10.8□□□□□ -0.68
LINC00661-204ENST00000549354 NADKO95544 446 aaPredicted RBP10.8□□□□□ -0.68
LINC00661-204ENST00000549354 FADS2O95864 444 aaKnown RBP10.8□□□□□ -0.68
LINC00661-204ENST00000549354 FGF4P08620 206 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 HTR1AP08908 422 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 ALDH3A2P51648 485 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 NUDT6P53370 316 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 NCS1P62166 190 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 SLC13A2Q13183 592 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 MAPKAPK3Q16644 382 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 PLEKHG6Q3KR16 790 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 SETMARQ53H47 684 aaPredicted RBP10.8□□□□□ -0.68
LINC00661-204ENST00000549354 CYP20A1Q6UW02 462 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 HID1Q8IV36 788 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 ALDH16A1Q8IZ83 802 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 LIX1Q8N485 282 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 ZNF555Q8NEP9 628 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 PIH1D2Q8WWB5 315 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 APOLD1Q96LR9 279 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 MTG2Q9H4K7 406 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 FAM118AQ9NWS6 357 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 ZNF229Q9UJW7 825 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 ANKRD36A6QL64 1941 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 SMIM30A4D0T7 59 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 RFXAPO00287 272 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 PGLSO95336 258 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 ESRRBO95718 433 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 ANXA6P08133 673 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 INHBBP09529 407 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 ZFP36L2P47974 494 aaKnown RBP10.8□□□□□ -0.68
LINC00661-204ENST00000549354 GALNT1Q10472 559 aaPredicted RBP10.8□□□□□ -0.68
LINC00661-204ENST00000549354 PWP1Q13610 501 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 DPY19L1Q2PZI1 675 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 TXNDC11Q6PKC3 985 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 ZNF621Q6ZSS3 439 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 NEK10Q6ZWH5 1172 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 SZRD1Q7Z422 152 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 VTCN1Q7Z7D3 282 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 KIAA0907Q7Z7F0 614 aaPredicted RBP10.8□□□□□ -0.68
LINC00661-204ENST00000549354 TSPAN33Q86UF1 283 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 ZNF420Q8TAQ5 688 aaPredicted RBP10.8□□□□□ -0.68
LINC00661-204ENST00000549354 TCEAL4Q96EI5 215 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 ASIC4Q96FT7 647 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 OR52E6Q96RD3 313 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 YIPF2Q9BWQ6 316 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 DPY30Q9C005 99 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 PAK1IP1Q9NWT1 392 aaPredicted RBP10.8□□□□□ -0.68
LINC00661-204ENST00000549354 CRLS1Q9UJA2 301 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 CDH7Q9ULB5 785 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 PRSS21Q9Y6M0 314 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 PIKFYVEQ9Y2I7 2098 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 CFAP54Q96N23 3096 aa10.8□□□□□ -0.68
LINC00661-204ENST00000549354 UPK1AO00322 258 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 SCAMP1O15126 338 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 KERAO60938 352 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 ABCB7O75027 752 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 SOCS5O75159 536 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 PRAMEF1O95521 474 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 S100BP04271 92 aaPredicted RBP10.79□□□□□ -0.68
LINC00661-204ENST00000549354 MAGEA8P43361 318 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 SFSWAPQ12872 951 aaKnown RBP10.79□□□□□ -0.68
LINC00661-204ENST00000549354 C6orf141Q5SZD1 244 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 PSMA8Q8TAA3 256 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 KIAA1191Q96A73 305 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 PCTPQ9UKL6 214 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 ZNF490Q9ULM2 529 aaPredicted RBP10.79□□□□□ -0.68
LINC00661-204ENST00000549354 CCL26Q9Y258 94 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 HS3ST2Q9Y278 367 aa10.79□□□□□ -0.68
LINC00661-204ENST00000549354 ERGIC3Q9Y282 383 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms