RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 NKAIN1Q4KMZ8 207 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 C1orf189Q5VU69 101 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 LRRC8EQ6NSJ5 796 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 UGT3A1Q6NUS8 523 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 SYDE1Q6ZW31 735 aaPredicted RBP10.93□□□□□ -0.66
BEST3-209ENST00000548658 TAX1BP1Q86VP1 789 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 TTC29Q8NA56 475 aaPredicted RBP10.93□□□□□ -0.66
BEST3-209ENST00000548658 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.93□□□□□ -0.66
BEST3-209ENST00000548658 FBXO15Q8NCQ5 510 aaPredicted RBP10.93□□□□□ -0.66
BEST3-209ENST00000548658 OR2L3Q8NG85 312 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 OR2A1Q8NGT9 310 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 OR2Y1Q8NGV0 311 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 SMPDL3AQ92484 453 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 INPP5DQ92835 1189 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 MARVELD3Q96A59 401 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 FKBP10Q96AY3 582 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 VPS50Q96JG6 964 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 SIGLEC10Q96LC7 697 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 SELENOSQ9BQE4 189 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 TRIM55Q9BYV6 548 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 TRIM4Q9C037 500 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 EPN3Q9H201 632 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 DHCR7Q9UBM7 475 aaKnown RBP10.93□□□□□ -0.66
BEST3-209ENST00000548658 ASIC3Q9UHC3 531 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 CIDEBQ9UHD4 219 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 PTRH2Q9Y3E5 179 aaKnown RBP10.93□□□□□ -0.66
BEST3-209ENST00000548658 ZNF451Q9Y4E5 1061 aa10.93□□□□□ -0.66
BEST3-209ENST00000548658 FITM1A5D6W6 292 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 MYO1CO00159 1063 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 DSCR3O14972 297 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 VPS26AO75436 327 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 CEACAM4O75871 244 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 CCNDBP1O95273 360 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 ONECUT2O95948 504 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 MPC1LP0DKB6 136 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 ERGP11308 486 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 PGAM1P18669 254 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 ITGAXP20702 1163 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 RPA3P35244 121 aaPredicted RBP10.92□□□□□ -0.66
BEST3-209ENST00000548658 BDKRB1P46663 353 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 ACSBG2Q5FVE4 666 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 RNASEH2BQ5TBB1 312 aaKnown RBP10.92□□□□□ -0.66
BEST3-209ENST00000548658 FCRL6Q6DN72 434 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 MRPL14Q6P1L8 145 aaKnown RBP10.92□□□□□ -0.66
BEST3-209ENST00000548658 TTLL10Q6ZVT0 673 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 DENND6AQ8IWF6 608 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 FAM20CQ8IXL6 584 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 PDIK1LQ8N165 341 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 CLEC1AQ8NC01 280 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 FAM136AQ96C01 138 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 ZNF285Q96NJ3 590 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 WDR54Q9H977 334 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 CUTCQ9NTM9 273 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 ANKMY1Q9P2S6 941 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 NXT1Q9UKK6 140 aaKnown RBP10.92□□□□□ -0.66
BEST3-209ENST00000548658 FBXO5Q9UKT4 447 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 RUVBL2Q9Y230 463 aaKnown RBP10.92□□□□□ -0.66
BEST3-209ENST00000548658 KLHL20Q9Y2M5 609 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 DHRS7Q9Y394 339 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 BSNQ9UPA5 3926 aa10.92□□□□□ -0.66
BEST3-209ENST00000548658 HYKKA2RU49 373 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 ARHGEF33A8MVX0 844 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 GFYI3L273 518 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 TXNDC9O14530 226 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 DNALI1O14645 258 aaPredicted RBP10.91□□□□□ -0.66
BEST3-209ENST00000548658 ZNF185O15231 689 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 DPM1O60762 260 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 ALPPP05187 535 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 HOXB1P14653 301 aaPredicted RBP10.91□□□□□ -0.66
BEST3-209ENST00000548658 VARSP26640 1264 aaKnown RBP10.91□□□□□ -0.66
BEST3-209ENST00000548658 OTX2P32243 289 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 SLC1A2P43004 574 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 GCGRP47871 477 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 EMP3P54852 163 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 ABATP80404 500 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 RELAQ04206 551 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 PRDX1Q06830 199 aaKnown RBP10.91□□□□□ -0.66
BEST3-209ENST00000548658 KCTD19Q17RG1 926 aaPredicted RBP10.91□□□□□ -0.66
BEST3-209ENST00000548658 CCSMST1Q4G0I0 132 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 HSP90AA5PQ58FG0 334 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 SPANXN3Q5MJ09 141 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 WASHC2DQ5SRD0 308 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 CPZQ66K79 652 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 PRMT9Q6P2P2 845 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 KIAA0408Q6ZU52 694 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 OVCH1Q7RTY7 1134 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 MRGPREQ86SM8 312 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 KCNMB4Q86W47 210 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 ATCAYQ86WG3 371 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 PALM2Q8IXS6 379 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 ASB11Q8WXH4 323 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 MIPEPQ99797 713 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 EBNA1BP2Q99848 306 aaKnown RBP10.91□□□□□ -0.66
BEST3-209ENST00000548658 ZFYVE21Q9BQ24 234 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 TRIM56Q9BRZ2 755 aaKnown RBP10.91□□□□□ -0.66
BEST3-209ENST00000548658 DPH7Q9BTV6 452 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 DDX47Q9H0S4 455 aaKnown RBP10.91□□□□□ -0.66
BEST3-209ENST00000548658 SLC26A1Q9H2B4 701 aa10.91□□□□□ -0.66
BEST3-209ENST00000548658 MRPS30Q9NP92 439 aaKnown RBP10.91□□□□□ -0.66
BEST3-209ENST00000548658 FBXO6Q9NRD1 293 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms