RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 LAIR2Q6ISS4 152 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 ZNF549Q6P9A3 640 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 SLC22A16Q86VW1 577 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 AMER2Q8N7J2 671 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 ADAMTS19Q8TE59 1207 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 GLMNQ92990 594 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 PDLIM5Q96HC4 596 aaKnown RBP16.65■□□□□ 0.26
LETMD1-210ENST00000547555 CEP44Q9C0F1 390 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 OBP2AQ9NY56 170 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 CCDC59Q9P031 241 aaKnown RBP16.65■□□□□ 0.26
LETMD1-210ENST00000547555 GOLGA8CPA6NN73 597 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 EVPLLA8MZ36 301 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 SUPT3HB4E1H0 165 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 ANKRD28O15084 1053 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 RGS10O43665 173 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 ERN1O75460 977 aaKnown RBP16.65■□□□□ 0.26
LETMD1-210ENST00000547555 SIX3O95343 332 aaPredicted RBP16.65■□□□□ 0.26
LETMD1-210ENST00000547555 NFKBIAP25963 317 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 CHRNA4P43681 627 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 MLLT6P55198 1093 aaPredicted RBP16.65■□□□□ 0.26
LETMD1-210ENST00000547555 TPTEP56180 551 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 RING1Q06587 406 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 CLCA4Q14CN2 919 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 PCBP2Q15366 365 aaKnown RBP eCLIP16.65■□□□□ 0.26
LETMD1-210ENST00000547555 TRIP4Q15650 581 aaPredicted RBP16.65■□□□□ 0.26
LETMD1-210ENST00000547555 NPTX1Q15818 432 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 ZNF404Q494X3 552 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 FBXO43Q4G163 708 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 ARHGAP36Q6ZRI8 547 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 MIB1Q86YT6 1006 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 FNDC5Q8NAU1 212 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 OR4L1Q8NH43 312 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 MCOLN3Q8TDD5 553 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 LGALS12Q96DT0 336 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 SLC39A13Q96H72 371 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 ZNF419Q96HQ0 510 aaPredicted RBP16.65■□□□□ 0.26
LETMD1-210ENST00000547555 TMEM74Q96NL1 305 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 SMG9Q9H0W8 520 aaKnown RBP16.65■□□□□ 0.26
LETMD1-210ENST00000547555 NUDT4Q9NZJ9 180 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 ADGRE2Q9UHX3 823 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 ZNF229Q9UJW7 825 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 CCL26Q9Y258 94 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 TLR6Q9Y2C9 796 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 PCDHGA10Q9Y5H3 936 aa16.65■□□□□ 0.26
LETMD1-210ENST00000547555 SLC12A8A0AV02 714 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 ANHXE9PGG2 379 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 WDR47O94967 919 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 TRAPPC2P0DI81 140 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 TRAPPC2BP0DI82 140 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 KPNA1P52294 538 aaPredicted RBP16.64■□□□□ 0.25
LETMD1-210ENST00000547555 ZNF77Q15935 545 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 IMPG1Q17R60 797 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 ALG1LQ6GMV1 187 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 MSANTD1Q6ZTZ1 278 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 USP43Q70EL4 1123 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 MTSS1LQ765P7 747 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 SYVN1Q86TM6 617 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 PLD3Q8IV08 490 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 LYSMD2Q8IV50 215 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 CELF5Q8N6W0 485 aaKnown RBP16.64■□□□□ 0.25
LETMD1-210ENST00000547555 SLC38A4Q969I6 547 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 ZNF486Q96H40 463 aaPredicted RBP16.64■□□□□ 0.25
LETMD1-210ENST00000547555 SIGLEC11Q96RL6 698 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 TMEM248Q9NWD8 314 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 HECAQ9UBI9 543 aaPredicted RBP16.64■□□□□ 0.25
LETMD1-210ENST00000547555 GRIP1Q9Y3R0 1128 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 DGKBQ9Y6T7 804 aa16.64■□□□□ 0.25
LETMD1-210ENST00000547555 LOC730098B7Z3J9 87 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 SNPHO15079 494 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 GREM1O60565 184 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 ECI2O75521 394 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 STC2O76061 302 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 ATXN1LP0C7T5 689 aaKnown RBP16.63■□□□□ 0.25
LETMD1-210ENST00000547555 TSPAN8P19075 237 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 KRT6CP48668 564 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 PRIM2P49643 509 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 IL10RBQ08334 325 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 HTR4Q13639 388 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 SEMA3AQ14563 771 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 KIAA0040Q15053 153 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 PROX2Q3B8N5 592 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 SIRPB2Q5JXA9 342 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 ARTNQ5T4W7 220 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 TTC23LQ6PF05 361 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 MICU2Q8IYU8 434 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 MCFD2Q8NI22 146 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 SETD6Q8TBK2 473 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 SH3RF2Q8TEC5 729 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 FUBP1Q96AE4 644 aaKnown RBP16.63■□□□□ 0.25
LETMD1-210ENST00000547555 PLD4Q96BZ4 506 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 RSPRY1Q96DX4 576 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 FCRL2Q96LA5 508 aaPredicted RBP16.63■□□□□ 0.25
LETMD1-210ENST00000547555 TEX37Q96LM6 180 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 BTBD2Q9BX70 525 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 ZFP14Q9HCL3 533 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 GKN1Q9NS71 199 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 PLCXD1Q9NUJ7 323 aa16.63■□□□□ 0.25
LETMD1-210ENST00000547555 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.63■□□□□ 0.253e-7■■□□□ 13.6
LETMD1-210ENST00000547555 TMEFF2Q9UIK5 374 aaPredicted RBP16.63■□□□□ 0.25
LETMD1-210ENST00000547555 SAMD4AQ9UPU9 718 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms