RNA–Protein interactions for RNA: ENST00000545549.1

LINC01965-204, Transcript of long intergenic non-protein coding RNA 1965, humanhuman

TSL 4 BASIC

Gene LINC01965, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01965-204ENST00000545549 MAD2L1Q13257 205 aaPredicted RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 CDK5R2Q13319 367 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 ZNF177Q13360 481 aaPredicted RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 TUBB3Q13509 450 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 TRIM25Q14258 630 aaKnown RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 TRIP6Q15654 476 aaKnown RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 SLC14A2Q15849 920 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 RBBP7Q16576 425 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 HNRNPA1L2Q32P51 320 aaKnown RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 FUT11Q495W5 492 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 LIN52Q52LA3 116 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 LRRC23Q53EV4 343 aaPredicted RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 MPPE1Q53F39 396 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 COQ5Q5HYK3 327 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 C9orf64Q5T6V5 341 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 OGFRL1Q5TC84 451 aaPredicted RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 ARHGAP40Q5TG30 622 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 VWA5B1Q5TIE3 1220 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 FAM72AQ5TYM5 149 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 LYPLAL1Q5VWZ2 237 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 LPCAT4Q643R3 524 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 ANKS6Q68DC2 871 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 FAM72DQ6L9T8 149 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 ESRP1Q6NXG1 681 aaKnown RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 FBXL22Q6P050 247 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 RANBP10Q6VN20 620 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 HACD2Q6Y1H2 254 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 B3GNT6Q6ZMB0 384 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 SPNS3Q6ZMD2 512 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 ZBTB49Q6ZSB9 765 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 FKBP9P1Q75LS8 142 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 CHST9Q7L1S5 443 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 GLT6D1Q7Z4J2 308 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 FAM72BQ86X60 149 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 CILP2Q8IUL8 1156 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 DENND1CQ8IV53 801 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 YAF2Q8IY57 180 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 AHI1Q8N157 1196 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 PLD6Q8N2A8 252 aaKnown RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 GALNT15Q8N3T1 639 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 FBXO39Q8N4B4 442 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 NPWQ8N729 165 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 PACRGLQ8N7B6 248 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 MDGA1Q8NFP4 955 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 OR56A4Q8NGH8 313 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 OR4L1Q8NH43 312 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 SPATA22Q8NHS9 363 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 RPLP0P6Q8NHW5 317 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 RHEBL1Q8TAI7 183 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 BRSK1Q8TDC3 778 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 BLOC1S5Q8TDH9 187 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 WFIKKN2Q8TEU8 576 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 TSPEARQ8WU66 669 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 HEXDCQ8WVB3 486 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 NRG4Q8WWG1 115 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 DNASE2BQ8WZ79 361 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 LZICQ8WZA0 190 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 EXT2Q93063 718 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 HDAC10Q969S8 669 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 ATP6V1E2Q96A05 226 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 FAM136AQ96C01 138 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 TUBGCP3Q96CW5 907 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 DGCR14Q96DF8 476 aaKnown RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 NXPE2Q96DL1 559 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 PHF21BQ96EK2 531 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 L3HYPDHQ96EM0 354 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 C19orf60Q96EN9 201 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 SGF29Q96ES7 293 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 IMP4Q96G21 291 aaKnown RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 PRR11Q96HE9 360 aaPredicted RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 ZNF419Q96HQ0 510 aaPredicted RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 HIC2Q96JB3 615 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 FEM1CQ96JP0 617 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 MRGPRX1Q96LB2 322 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 CNBD2Q96M20 576 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 TMEM74Q96NL1 305 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 SH3GL1Q99961 368 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 FEM1AQ9BSK4 669 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 RSRP1Q9BUV0 290 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 C9orf16Q9BUW7 83 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 BBS2Q9BXC9 721 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 ERVK-6Q9BXR3 956 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 NUSAP1Q9BXS6 441 aaKnown RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 C20orf27Q9GZN8 174 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 MIR1-1HGQ9H1L0 117 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 RSPH9Q9H1X1 276 aaPredicted RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 MAGEH1Q9H213 219 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 TFB2MQ9H5Q4 396 aaKnown RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 WDR55Q9H6Y2 383 aaPredicted RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 COPS7BQ9H9Q2 264 aaPredicted RBP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 MEAF6Q9HAF1 191 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 ARNT2Q9HBZ2 717 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 MID1IP1Q9NPA3 183 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 ITM2CQ9NQX7 267 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 C1GALT1Q9NS00 363 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 TMEM45AQ9NWC5 275 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.52□□□□□ -1.85
LINC01965-204ENST00000545549 PKD2L2Q9NZM6 624 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 CD274Q9NZQ7 290 aa3.52□□□□□ -1.85
LINC01965-204ENST00000545549 CCDC167Q9P0B6 97 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms