RNA–Protein interactions for RNA: ENST00000537403.5

SEC23A-202, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 4,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-202ENST00000537403 PRRG4Q9BZD6 226 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 DENND2DQ9H6A0 471 aaPredicted RBP3.97□□□□□ -1.77
SEC23A-202ENST00000537403 ZNF395Q9H8N7 513 aaPredicted RBP3.97□□□□□ -1.77
SEC23A-202ENST00000537403 S100A14Q9HCY8 104 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 SIRPGQ9P1W8 387 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 MKL2Q9ULH7 1088 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 CHD7Q9P2D1 2997 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 MCM3APO60318 1980 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.97□□□□□ -1.77
SEC23A-202ENST00000537403 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.97□□□□□ -1.77
SEC23A-202ENST00000537403 FAM86C2PA6NEL3 165 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 HEPACAM2A8MVW5 462 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 TNFRSF11BO00300 401 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 B3GALT2O43825 422 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 SOCS5O75159 536 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 LEFTY1O75610 366 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 SCELO95171 688 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 PAPSS2O95340 614 aaPredicted RBP3.97□□□□□ -1.77
SEC23A-202ENST00000537403 TNFP01375 233 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 ITGB1P05556 798 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 IL7RP16871 459 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 ALOX12P18054 663 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 PRPS1L1P21108 318 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 ARRB1P49407 418 aaPredicted RBP3.97□□□□□ -1.77
SEC23A-202ENST00000537403 CCR8P51685 355 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 ATP12AP54707 1039 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 RAB33AQ14088 237 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 TCEAL1Q15170 157 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 SLC9B1Q4ZJI4 515 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 CEP78Q5JTW2 689 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 ZNF57Q68EA5 555 aaPredicted RBP3.97□□□□□ -1.77
SEC23A-202ENST00000537403 REP15Q6BDI9 236 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 ALKBH2Q6NS38 261 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 TNFAIP8L2Q6P589 184 aaPredicted RBP3.97□□□□□ -1.77
SEC23A-202ENST00000537403 FAM171BQ6P995 826 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 AGTRAPQ6RW13 159 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 ARMCX6Q7L4S7 300 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 TRIM74Q86UV6 250 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 CAND1Q86VP6 1230 aaKnown RBP3.97□□□□□ -1.77
SEC23A-202ENST00000537403 CILP2Q8IUL8 1156 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 NXPE1Q8N323 547 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 MOSPD2Q8NHP6 518 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 PMEPA1Q969W9 287 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 MPP4Q96JB8 637 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 ZNF641Q96N77 438 aaPredicted RBP3.97□□□□□ -1.77
SEC23A-202ENST00000537403 STRA6Q9BX79 667 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 EPB41L1Q9H4G0 881 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 NSUN3Q9H649 340 aaKnown RBP3.97□□□□□ -1.77
SEC23A-202ENST00000537403 NEK6Q9HC98 313 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 ANKHQ9HCJ1 492 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 RASSF1Q9NS23 344 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 TMLHEQ9NVH6 421 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 PDP1Q9P0J1 537 aaPredicted RBP3.97□□□□□ -1.77
SEC23A-202ENST00000537403 TAC3Q9UHF0 121 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 GMEB2Q9UKD1 530 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 TMEM98Q9Y2Y6 226 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 PSAT1Q9Y617 370 aa3.97□□□□□ -1.77
SEC23A-202ENST00000537403 LOC730098B7Z3J9 87 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 TMEM150CB9EJG8 249 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 AXIN1O15169 862 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 KMOO15229 486 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 ERI3O43414 337 aaKnown RBP3.96□□□□□ -1.78
SEC23A-202ENST00000537403 ITM2AO43736 263 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 DNAJA2O60884 412 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 IFNGP01579 166 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 GPIP06744 558 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 NCK1P16333 377 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 CSNK2A2P19784 350 aaPredicted RBP3.96□□□□□ -1.78
SEC23A-202ENST00000537403 KCNA5P22460 613 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 VIPR2P41587 438 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 CTSOP43234 321 aaPredicted RBP3.96□□□□□ -1.78
SEC23A-202ENST00000537403 RPL5P46777 297 aaKnown RBP3.96□□□□□ -1.78
SEC23A-202ENST00000537403 PGDP52209 483 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 NR1H2P55055 460 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 MTPNP58546 118 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 NTHL1P78549 312 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 BNC1Q01954 994 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 TMEM115Q12893 351 aaPredicted RBP3.96□□□□□ -1.78
SEC23A-202ENST00000537403 KLF1Q13351 362 aaPredicted RBP3.96□□□□□ -1.78
SEC23A-202ENST00000537403 MED22Q15528 200 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 TRIM71Q2Q1W2 868 aaKnown RBP3.96□□□□□ -1.78
SEC23A-202ENST00000537403 DCST1Q5T197 706 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 PIK3R6Q5UE93 754 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 PDE12Q6L8Q7 609 aaKnown RBP3.96□□□□□ -1.78
SEC23A-202ENST00000537403 NEK5Q6P3R8 708 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 TRAF7Q6Q0C0 670 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 MBOAT1Q6ZNC8 495 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 RINLQ6ZS11 566 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 FAM220AQ7Z4H9 259 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 MRPL10Q7Z7H8 261 aaKnown RBP3.96□□□□□ -1.78
SEC23A-202ENST00000537403 GALNT5Q7Z7M9 940 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 NUDT13Q86X67 352 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 TMC8Q8IU68 726 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.96□□□□□ -1.78
SEC23A-202ENST00000537403 IZUMO1Q8IYV9 350 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 TMEM130Q8N3G9 435 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 TTC9BQ8N6N2 239 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 ARL10Q8N8L6 244 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 UXS1Q8NBZ7 420 aa3.96□□□□□ -1.78
SEC23A-202ENST00000537403 ATP6V1C2Q8NEY4 427 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms