RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 DGAT2Q96PD7 388 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 ING3Q9NXR8 418 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 CCDC59Q9P031 241 aaKnown RBP11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 EME2A4GXA9 379 aaPredicted RBP11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 PRORSD1PA6NEY8 169 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 CER1O95813 267 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 MPC1LP0DKB6 136 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 STAT5AP42229 794 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 SLBPQ14493 270 aaKnown RBP eCLIP11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 PDSS1Q5T2R2 415 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 PLXDC1Q8IUK5 500 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 TMEM126BQ8IUX1 230 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 EGFL6Q8IUX8 553 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 DENND6AQ8IWF6 608 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 CACTIN-AS1Q8N1I8 211 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 NAT8LQ8N9F0 302 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 DNASE1L2Q92874 299 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 ITFG2Q969R8 447 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 LRRC46Q96FV0 321 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 C7orf26Q96N11 449 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 PWWP2AQ96N64 755 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 S100A14Q9HCY8 104 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 PAK6Q9NQU5 681 aaPredicted RBP11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 MAT2BQ9NZL9 334 aa11.01□□□□□ -0.65
AMBRA1-211ENST00000533727 A0A0D9SEW6 157 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 PLIN3O60664 434 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 TMCC2O75069 709 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 ZMPSTE24O75844 475 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 ZNF12P17014 697 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 MACC1Q6ZN28 852 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 RNF44Q7L0R7 432 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 MFSD6LQ8IWD5 586 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 OR10H5Q8NGA6 315 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 OR6C4Q8NGE1 309 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 MOSPD2Q8NHP6 518 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 SLC9A6Q92581 669 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 PELOQ9BRX2 385 aaKnown RBP11□□□□□ -0.65
AMBRA1-211ENST00000533727 KIFC1Q9BW19 673 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 SLC17A9Q9BYT1 436 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 SEC14L3Q9UDX4 400 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 EIF2B4Q9UI10 523 aaKnown RBP11□□□□□ -0.65
AMBRA1-211ENST00000533727 TBX21Q9UL17 535 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 CAPN8A6NHC0 703 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 GFRA2O00451 464 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 RAB25P57735 213 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 RFX4Q33E94 735 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 PRRT3Q5FWE3 981 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 LPCAT4Q643R3 524 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 AMIGO2Q86SJ2 522 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 SPPL3Q8TCT6 385 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 IGSF8Q969P0 613 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 RANBP9Q96S59 729 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 ARL8BQ9NVJ2 186 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 LRP5O75197 1615 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 HAT1O14929 419 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 SCAMP1O15126 338 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 YKT6O15498 198 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 TAS2R41P59536 307 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 OGDHQ02218 1023 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 NRG1Q02297 640 aaPredicted RBP11□□□□□ -0.65
AMBRA1-211ENST00000533727 OC90Q02509 493 aaPredicted RBP11□□□□□ -0.65
AMBRA1-211ENST00000533727 VN1R5Q7Z5H4 357 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 RANBP3LQ86VV4 465 aaPredicted RBP11□□□□□ -0.65
AMBRA1-211ENST00000533727 TMEM25Q86YD3 366 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 ZNF527Q8NB42 609 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 KLF16Q9BXK1 252 aaPredicted RBP11□□□□□ -0.65
AMBRA1-211ENST00000533727 SERINC1Q9NRX5 453 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 LYARQ9NX58 379 aaKnown RBP11□□□□□ -0.65
AMBRA1-211ENST00000533727 ZNF282Q9UDV7 671 aaPredicted RBP11□□□□□ -0.65
AMBRA1-211ENST00000533727 ZNF221Q9UK13 617 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 MYH14Q7Z406 1995 aaKnown RBP11□□□□□ -0.65
AMBRA1-211ENST00000533727 IQCF5A8MTL0 148 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 SIN3BO75182 1162 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 BEST1O76090 585 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 PREPP48147 710 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 POLR2JP52435 117 aaKnown RBP11□□□□□ -0.65
AMBRA1-211ENST00000533727 GDF10P55107 478 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 ZBTB6Q15916 424 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 IL23RQ5VWK5 629 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 RTL4Q6ZR62 310 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 GPRIN1Q7Z2K8 1008 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 MCFD2Q8NI22 146 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 ADAMTS18Q8TE60 1221 aa11□□□□□ -0.65
AMBRA1-211ENST00000533727 DENND2DQ9H6A0 471 aaPredicted RBP11□□□□□ -0.65
AMBRA1-211ENST00000533727 MARF1Q9Y4F3 1742 aaKnown RBP10.99□□□□□ -0.65
AMBRA1-211ENST00000533727 WWP2O00308 870 aa10.99□□□□□ -0.65
AMBRA1-211ENST00000533727 NIPSNAP2O75323 286 aa10.99□□□□□ -0.65
AMBRA1-211ENST00000533727 UBAP2LQ14157 1087 aaKnown RBP10.99□□□□□ -0.65
AMBRA1-211ENST00000533727 SHHQ15465 462 aa10.99□□□□□ -0.65
AMBRA1-211ENST00000533727 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.99□□□□□ -0.654e-7■■■□□ 17.3
AMBRA1-211ENST00000533727 HNRNPA1L2Q32P51 320 aaKnown RBP10.99□□□□□ -0.65
AMBRA1-211ENST00000533727 TIGD2Q4W5G0 525 aa10.99□□□□□ -0.65
AMBRA1-211ENST00000533727 LIX1Q8N485 282 aa10.99□□□□□ -0.65
AMBRA1-211ENST00000533727 COX18Q8N8Q8 333 aa10.99□□□□□ -0.65
AMBRA1-211ENST00000533727 C11orf65Q8NCR3 313 aa10.99□□□□□ -0.65
AMBRA1-211ENST00000533727 TMEM174Q8WUU8 243 aa10.99□□□□□ -0.65
AMBRA1-211ENST00000533727 KLHL6Q8WZ60 621 aa10.99□□□□□ -0.65
AMBRA1-211ENST00000533727 TMEM125Q96AQ2 219 aa10.99□□□□□ -0.65
AMBRA1-211ENST00000533727 PREBQ9HCU5 417 aa10.99□□□□□ -0.65
AMBRA1-211ENST00000533727 ABCA3Q99758 1704 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms