RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 SMYD1Q8NB12 490 aa15.83■□□□□ 0.12
USP42-207ENST00000521713 TRPV5Q9NQA5 729 aa15.83■□□□□ 0.12
USP42-207ENST00000521713 PGRP06401 933 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 MAGEA8P43361 318 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 IDH3AP50213 366 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 RHAGQ02094 409 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 MVKQ03426 396 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 IL18Q14116 193 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 FBXO48Q5FWF7 155 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 PRRG4Q9BZD6 226 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 ALG2Q9H553 416 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 COQ10BQ9H8M1 238 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 MAN2B2Q9Y2E5 1009 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 N6AMT1Q9Y5N5 214 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 UGT2B17O75795 530 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 IFNGP01579 166 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 TFPIP10646 304 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 NRG1Q02297 640 aaPredicted RBP15.82■□□□□ 0.12
USP42-207ENST00000521713 AMZ1Q400G9 498 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 MBOAT1Q6ZNC8 495 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 C12orf76Q8N812 135 aaPredicted RBP15.82■□□□□ 0.12
USP42-207ENST00000521713 B4GALT6Q9UBX8 382 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 GMEB2Q9UKD1 530 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 ELOVL7A1L3X0 281 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 HAS3O00219 553 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 SLC30A4O14863 429 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 SNAPC5O75971 98 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 LIPEQ05469 1076 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 RALGDSQ12967 914 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 PRAMEF14Q5SWL7 426 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 PRAMEF13Q5VWM6 474 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 GKN2Q86XP6 184 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 PQLC3Q8N755 202 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 DNASE1L2Q92874 299 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 ZBED6CLQ96FA7 236 aaPredicted RBP15.82■□□□□ 0.12
USP42-207ENST00000521713 PSKH2Q96QS6 385 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 KXD1Q9BQD3 176 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.82■□□□□ 0.12
USP42-207ENST00000521713 PCP4L1A6NKN8 68 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 B4DGG1 531 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 C8BP07358 591 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 PFKLP17858 780 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 PLA2G16P53816 162 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 RPS14P62263 151 aaKnown RBP15.82■□□□□ 0.12
USP42-207ENST00000521713 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.82■□□□□ 0.12
USP42-207ENST00000521713 LRRC70Q7Z2Q7 622 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 CYP2U1Q7Z449 544 aa15.82■□□□□ 0.12
USP42-207ENST00000521713 HEPACAM2A8MVW5 462 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 GRIA1P42261 906 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 OR2B6P58173 313 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 ZDHHC24Q6UX98 284 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 C14orf80Q86SX3 495 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 NATD1Q8N6N6 113 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 DNAJB8Q8NHS0 232 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 TFGQ92734 400 aaPredicted RBP15.81■□□□□ 0.12
USP42-207ENST00000521713 C1GALT1C1Q96EU7 318 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 ERMAPQ96PL5 475 aaPredicted RBP15.81■□□□□ 0.12
USP42-207ENST00000521713 FIZ1Q96SL8 496 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 NKX2-4Q9H2Z4 354 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 ZDHHC18Q9NUE0 388 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 AP2A2O94973 939 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 ATF4P18848 351 aaPredicted RBP15.81■□□□□ 0.12
USP42-207ENST00000521713 GRIA2P42262 883 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 TAS2R50P59544 299 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 MERTKQ12866 999 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 SLC25A24Q6NUK1 477 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 ERN2Q76MJ5 926 aaKnown RBP15.81■□□□□ 0.12
USP42-207ENST00000521713 BEND5Q7L4P6 421 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 KLHDC7BQ96G42 594 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 FAM83CQ9BQN1 747 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 FLRT1Q9NZU1 646 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 M0QZQ0 153 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 IMPDH1P20839 514 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 DNAJB1P25685 340 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 OMPP47874 163 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 ZNF805Q5CZA5 627 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 DCAF12L1Q5VU92 463 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 ZNF420Q8TAQ5 688 aaPredicted RBP15.81■□□□□ 0.12
USP42-207ENST00000521713 FEM1AQ9BSK4 669 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 SLC22A4Q9H015 551 aa15.81■□□□□ 0.12
USP42-207ENST00000521713 NSUN3Q9H649 340 aaKnown RBP15.81■□□□□ 0.12
USP42-207ENST00000521713 TTC24A2A3L6 582 aaPredicted RBP15.8■□□□□ 0.12
USP42-207ENST00000521713 CPED1A4D0V7 1026 aa15.8■□□□□ 0.12
USP42-207ENST00000521713 C2orf71A6NGG8 1288 aa15.8■□□□□ 0.12
USP42-207ENST00000521713 KLF11O14901 512 aa15.8■□□□□ 0.12
USP42-207ENST00000521713 PIP5K1BO14986 540 aa15.8■□□□□ 0.12
USP42-207ENST00000521713 GSRP00390 522 aa15.8■□□□□ 0.12
USP42-207ENST00000521713 CYP4B1P13584 511 aa15.8■□□□□ 0.12
USP42-207ENST00000521713 HLA-EP13747 358 aa15.8■□□□□ 0.12
USP42-207ENST00000521713 MSX2P35548 267 aaPredicted RBP15.8■□□□□ 0.12
USP42-207ENST00000521713 HERVK_113P63132 956 aa15.8■□□□□ 0.12
USP42-207ENST00000521713 RTL4Q6ZR62 310 aa15.8■□□□□ 0.12
USP42-207ENST00000521713 NUDT13Q86X67 352 aa15.8■□□□□ 0.12
USP42-207ENST00000521713 CAMKVQ8NCB2 501 aa15.8■□□□□ 0.12
USP42-207ENST00000521713 RIT1Q92963 219 aa15.8■□□□□ 0.12
USP42-207ENST00000521713 PAAF1Q9BRP4 392 aa15.8■□□□□ 0.12
USP42-207ENST00000521713 ERVK-6Q9BXR3 956 aa15.8■□□□□ 0.12
USP42-207ENST00000521713 MRM3Q9HC36 420 aaKnown RBP15.8■□□□□ 0.12
USP42-207ENST00000521713 MKLN1Q9UL63 735 aa15.8■□□□□ 0.12
USP42-207ENST00000521713 FAM159BA6NKW6 160 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms