RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 AKT1P31749 480 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 TECP42680 631 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 RECQLP46063 649 aaPredicted RBP-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 NDST2P52849 883 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 SLC25A1P53007 311 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 EIF5P55010 431 aaKnown RBP-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 SRPXP78539 464 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 TNK1Q13470 666 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 MTMR1Q13613 665 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 SLC18A3Q16572 532 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 PRSS8Q16651 343 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 DCST2Q5T1A1 773 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 TSPO2Q5TGU0 170 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 LIPKQ5VXJ0 399 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 OVCH2Q7RTZ1 564 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 RPAP2Q8IXW5 612 aaPredicted RBP-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 TTC5Q8N0Z6 440 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 GPR137CQ8N3F9 429 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 CCDC150Q8NCX0 1101 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 HUS1BQ8NHY5 278 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 NCSTNQ92542 709 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 SLC22A18Q96BI1 424 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 IQCDQ96DY2 449 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 HSPBAP1Q96EW2 488 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 SLC22A12Q96S37 553 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 NKX3-1Q99801 234 aaPredicted RBP-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 HERC2P3Q9BVR0 1158 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 MTHFD2LQ9H903 347 aaPredicted RBP-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 CA5BQ9Y2D0 317 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 CACNG2Q9Y698 323 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 CYP46A1Q9Y6A2 500 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 DGKBQ9Y6T7 804 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 LRP2P98164 4655 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 IL16Q14005 1332 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 SALL1Q9NSC2 1324 aa-1.15□□□□□ -2.59
RNU6-542P-201ENST00000516405 HIVEP3Q5T1R4 2406 aa-1.16□□□□□ -2.59
RNU6-542P-201ENST00000516405 ZANQ9Y493 2812 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 IGHV3-35A0A0C4DH35 117 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 A0A1W2PNN7 141 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 CCT8L1PA6NM43 557 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 RPL36A-HNRNPH2H7BZ11 118 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 RTN2O75298 545 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 SKAP2O75563 359 aaPredicted RBP-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 METTL18O95568 372 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 ACSL3O95573 720 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 TRUB2O95900 331 aaKnown RBP-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 KRT14P02533 472 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 MYL4P12829 197 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 CCND1P24385 295 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 HSD3B2P26439 372 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 RPS9P46781 194 aaKnown RBP-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 CAV2P51636 162 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 GPR143P51810 404 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 RIDAP52758 137 aaKnown RBP-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 HMGCS2P54868 508 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 RPS3AP61247 264 aaKnown RBP-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 RPS18P62269 152 aaKnown RBP-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 DEFB103AP81534 67 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 PRKCEQ02156 737 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 DAZ2Q13117 558 aaKnown RBP-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 SLC39A6Q13433 755 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 BIRC3Q13489 604 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 IL11RAQ14626 422 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 MORN3Q6PF18 240 aaPredicted RBP-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 NEGR1Q7Z3B1 354 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 CARM1Q86X55 608 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 ZNF677Q86XU0 584 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 ARHGAP12Q8IWW6 846 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 CPXM2Q8N436 756 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 SLC5A8Q8N695 610 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 C1orf52Q8N6N3 182 aaKnown RBP-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 PTGR2Q8N8N7 351 aaPredicted RBP-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 CHAC2Q8WUX2 184 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 HDAC2Q92769 488 aaKnown RBP-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 MRFAP1L1Q96HT8 127 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 PIGSQ96S52 555 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 CCT8L2Q96SF2 557 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 SIN3AQ96ST3 1273 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 CDRT15Q96T59 188 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 DDX24Q9GZR7 859 aaKnown RBP eCLIP-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 CTDSP1Q9GZU7 261 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 CPVLQ9H3G5 476 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 NXF3Q9H4D5 531 aaKnown RBP-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 DAZ3Q9NR90 486 aaKnown RBP-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 ZCCHC3Q9NUD5 404 aaKnown RBP-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 RGL1Q9NZL6 768 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 CTNNAL1Q9UBT7 734 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 ZNF346Q9UL40 294 aaKnown RBP-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 CARD8Q9Y2G2 431 aa-1.16□□□□□ -2.6
RNU6-542P-201ENST00000516405 TRGV8A0A0C4DH27 118 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 FAM166BA8MTA8 275 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 E9PI62 339 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 E2F3O00716 465 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 VCYO14598 125 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 ZNF749O43361 778 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 ECE2O60344 883 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 GLRA3O75311 464 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 CDK2AP2O75956 126 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 DDHD2O94830 711 aa-1.17□□□□□ -2.6
RNU6-542P-201ENST00000516405 RCBTB2O95199 551 aa-1.17□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms