RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 SLC27A6Q9Y2P4 619 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 MUC22E2RYF6 1773 aaPredicted RBP7.23□□□□□ -1.25
CLIP1-205ENST00000514271 H7C0C1 242 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 SHOXO15266 292 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 FGF10O15520 208 aaPredicted RBP7.23□□□□□ -1.25
CLIP1-205ENST00000514271 HSPA4LO95757 839 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 PRKCAP17252 672 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 DDOSTP39656 456 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 ATP5OP48047 213 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 LIMS1P48059 325 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 CENPAP49450 140 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 NTHL1P78549 312 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 NME3Q13232 169 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 ORC1Q13415 861 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 DAG1Q14118 895 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 EML3Q32P44 896 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 LRIF1Q5T3J3 769 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 ZNF852Q6ZMS4 543 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 SPNS2Q8IVW8 549 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 CTAGE3PQ8IX95 158 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 UBQLNLQ8IYU4 475 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 DTWD1Q8N5C7 304 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 ARL14EPQ8N8R7 260 aaPredicted RBP7.23□□□□□ -1.25
CLIP1-205ENST00000514271 BMPERQ8N8U9 685 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 OR8H1Q8NGG4 311 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 SCAMP5Q8TAC9 235 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 PYCR2Q96C36 320 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 MOV10Q9HCE1 1003 aaKnown RBP7.23□□□□□ -1.25
CLIP1-205ENST00000514271 FBRSL1Q9HCM7 1045 aaKnown RBP7.23□□□□□ -1.25
CLIP1-205ENST00000514271 SERHLQ9NQF3 203 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 DKK3Q9UBP4 350 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 DOLKQ9UPQ8 538 aa7.23□□□□□ -1.25
CLIP1-205ENST00000514271 SLC12A8A0AV02 714 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 YJEFN3A6XGL0 299 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 ERVH48-1M5A8F1 160 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 PPP6CO00743 305 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 MRASO14807 208 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 CAPN5O15484 640 aaPredicted RBP7.22□□□□□ -1.25
CLIP1-205ENST00000514271 GPR37L1O60883 481 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 SOAT2O75908 522 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 STC2O76061 302 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 ALX3O95076 343 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 S1PR4O95977 384 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 ATXN1LP0C7T5 689 aaKnown RBP7.22□□□□□ -1.25
CLIP1-205ENST00000514271 GRK5P34947 590 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 CLK3P49761 638 aaKnown RBP7.22□□□□□ -1.25
CLIP1-205ENST00000514271 RACK1P63244 317 aaKnown RBP7.22□□□□□ -1.25
CLIP1-205ENST00000514271 MRPS21P82921 87 aaKnown RBP7.22□□□□□ -1.25
CLIP1-205ENST00000514271 CD47Q08722 323 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 ADGRF1Q5T601 910 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 TXNDC8Q6A555 127 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 FAM180BQ6P0A1 224 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 TXNDC11Q6PKC3 985 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 PROSER1Q86XN7 944 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 DDIASQ8IXT1 998 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 C10orf111Q8N326 155 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 RNF148Q8N7C7 305 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 SIMC1Q8NDZ2 872 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 HIPK4Q8NE63 616 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 OR4M1Q8NGD0 313 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 OR8J3Q8NGG0 315 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 CDKL2Q92772 493 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 C19orf60Q96EN9 201 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 ZNF599Q96NL3 588 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 EFHD1Q9BUP0 239 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 CDADC1Q9BWV3 514 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 NMUR1Q9HB89 426 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 ACOXLQ9NUZ1 547 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 SLAMF8Q9P0V8 285 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 SEPT10Q9P0V9 454 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 CFAP97Q9P2B7 532 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 SEPT3Q9UH03 358 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 ANAPC2Q9UJX6 822 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 MAN2B2Q9Y2E5 1009 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 NOSIPQ9Y314 301 aaKnown RBP7.22□□□□□ -1.25
CLIP1-205ENST00000514271 LOC285095A0A1B0GVY8 99 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 CHURC1-FNTBB4DL54 471 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 PIK3R2O00459 728 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 GAAP10253 952 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 PRPH2P23942 346 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 MAPKAPK2P49137 400 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 RGS7P49802 495 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 SULT1E1P49888 294 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 KCNQ1P51787 676 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 TAS2R39P59534 338 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 ILF2Q12905 390 aaKnown RBP7.22□□□□□ -1.25
CLIP1-205ENST00000514271 TNK1Q13470 666 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 ZNF460Q14592 562 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 TIGD2Q4W5G0 525 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 RNLSQ5VYX0 342 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 TANGO2Q6ICL3 276 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 PTAR1Q7Z6K3 402 aaPredicted RBP7.22□□□□□ -1.25
CLIP1-205ENST00000514271 ADAMTSL2Q86TH1 951 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 SPPL2CQ8IUH8 684 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 DEFB106AQ8N104 65 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 OR7G1Q8NGA0 311 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 C11orf24Q96F05 449 aaPredicted RBP7.22□□□□□ -1.25
CLIP1-205ENST00000514271 MAGED4Q96JG8 741 aa7.22□□□□□ -1.25
CLIP1-205ENST00000514271 FCRL2Q96LA5 508 aaPredicted RBP7.22□□□□□ -1.25
CLIP1-205ENST00000514271 WDFY2Q96P53 400 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms