RNA–Protein interactions for RNA: ENST00000513734.1

HMGN1P17-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 17, humanhuman

BASIC

Gene HMGN1P17, Length 295 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P17-201ENST00000513734 NUDT22Q9BRQ3 303 aa6.29□□□□□ -1.4
HMGN1P17-201ENST00000513734 SSBP3Q9BWW4 388 aaPredicted RBP6.29□□□□□ -1.4
HMGN1P17-201ENST00000513734 TDRD1Q9BXT4 1180 aaKnown RBP6.29□□□□□ -1.4
HMGN1P17-201ENST00000513734 TEX101Q9BY14 249 aa6.29□□□□□ -1.4
HMGN1P17-201ENST00000513734 LRRN3Q9H3W5 708 aa6.29□□□□□ -1.4
HMGN1P17-201ENST00000513734 RDH14Q9HBH5 336 aa6.29□□□□□ -1.4
HMGN1P17-201ENST00000513734 ARFGAP3Q9NP61 516 aa6.29□□□□□ -1.4
HMGN1P17-201ENST00000513734 RBM22Q9NW64 420 aaKnown RBP eCLIP6.29□□□□□ -1.4
HMGN1P17-201ENST00000513734 FOXJ2Q9P0K8 574 aa6.29□□□□□ -1.4
HMGN1P17-201ENST00000513734 TMEM9Q9P0T7 183 aa6.29□□□□□ -1.4
HMGN1P17-201ENST00000513734 TAAR2Q9P1P5 351 aa6.29□□□□□ -1.4
HMGN1P17-201ENST00000513734 TAGLN3Q9UI15 199 aa6.29□□□□□ -1.4
HMGN1P17-201ENST00000513734 MED16Q9Y2X0 877 aa6.29□□□□□ -1.4
HMGN1P17-201ENST00000513734 BZW2Q9Y6E2 419 aaKnown RBP6.29□□□□□ -1.4
HMGN1P17-201ENST00000513734 SETXQ7Z333 2677 aaKnown RBP6.29□□□□□ -1.4
HMGN1P17-201ENST00000513734 NBASA2RRP1 2371 aa6.29□□□□□ -1.4
HMGN1P17-201ENST00000513734 SPTA1P02549 2419 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 PRAMEF33A0A0G2JMD5 474 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 A0A0J9YYE9 177 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 LRRD1A4D1F6 860 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 F5H423 210 aaPredicted RBP6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 GOLGA6L19H0YKK7 550 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 PYCARD-AS1I3L0S3 204 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 MATN3O15232 486 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 PPM1DO15297 605 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 RRP8O43159 456 aaKnown RBP6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 B4GAT1O43505 415 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 PRAMEF10O60809 474 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 TCEA3O75764 348 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 UNC5CO95185 931 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 TRBC1P01850 177 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 SLC4A1P02730 911 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 CYP2A6P11509 494 aaPredicted RBP6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 TNNT1P13805 278 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 CCNB1P14635 433 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 PECAM1P16284 738 aaPredicted RBP6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 KDELR1P24390 212 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 SLC5A2P31639 672 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 SERPINB6P35237 376 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 UGT1A5P35504 534 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 HSPA9P38646 679 aaKnown RBP6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 CD86P42081 329 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 HTR3AP46098 478 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 MARCKSL1P49006 195 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 BLKP51451 505 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 STC1P52823 247 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 TPM4P67936 248 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 B4GALNT1Q00973 533 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 GALNT3Q14435 633 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 C16orf72Q14CZ0 275 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 AMZ1Q400G9 498 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 CRB2Q5IJ48 1285 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 ARMC12Q5T9G4 340 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 LVRNQ6Q4G3 990 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 KDELC2Q7Z4H8 507 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 C17orf82Q86X59 251 aaPredicted RBP6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 NAGSQ8N159 534 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 ZNF808Q8N4W9 903 aaPredicted RBP6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 ZNF248Q8NDW4 579 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 ACRBPQ8NEB7 543 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 Q8TCH9 128 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 KCNE4Q8WWG9 221 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 SCRN2Q96FV2 425 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 GFM1Q96RP9 751 aaKnown RBP6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 ZNF670Q9BS34 389 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 RIOK2Q9BVS4 552 aaKnown RBP6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 DPEP2Q9H4A9 486 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 GPR35Q9HC97 309 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 PHPT1Q9NRX4 125 aaPredicted RBP6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 ABHD10Q9NUJ1 306 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 DONSONQ9NYP3 566 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 RCOR3Q9P2K3 495 aaPredicted RBP6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 LRIT1Q9P2V4 623 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 PISDQ9UG56 409 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 SLC17A4Q9Y2C5 497 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 PPIL1Q9Y3C6 166 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 SEC16AO15027 2179 aa6.28□□□□□ -1.4
HMGN1P17-201ENST00000513734 MYO18BQ8IUG5 2567 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 CCDC187A0A096LP49 1063 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 C1orf232A0A0U1RR37 186 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 ABHD16AO95870 558 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 JCHAINP01591 159 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 IVLP07476 585 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 HOXC4P09017 264 aaPredicted RBP6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 H2AFZP0C0S5 128 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 CCL4P13236 92 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 CCNCP24863 283 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 CD1CP29017 333 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 CA5AP35218 305 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 ACTR1BP42025 376 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 GPR1P46091 355 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 INHBCP55103 352 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 ERVPABLB-1P60509 514 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 ACTR1AP61163 376 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 POLR2LP62875 67 aaKnown RBP6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 DYNLT1P63172 113 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 NHLH2Q02577 135 aa6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 ZFP36L1Q07352 338 aaKnown RBP6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 PPIDQ08752 370 aaKnown RBP6.27□□□□□ -1.41
HMGN1P17-201ENST00000513734 SLC13A2Q13183 592 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms