RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 RPS24P62847 133 aaKnown RBP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 DSC2Q02487 901 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 POLD3Q15054 466 aaPredicted RBP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 PCBP2Q15366 365 aaKnown RBP eCLIP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 TAF1AQ15573 450 aaPredicted RBP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 RBBP7Q16576 425 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 ZNF528Q3MIS6 628 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 XAF1Q6GPH4 301 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 GALNT18Q6P9A2 607 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 TTC23LQ6PF05 361 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 CRTC3Q6UUV7 619 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 ADAMTSL2Q86TH1 951 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 PIM3Q86V86 326 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 TMCO5AQ8N6Q1 288 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 SCAIQ8N9R8 606 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 RPLP0P6Q8NHW5 317 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 KCNJ9Q92806 393 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 FUBP1Q96AE4 644 aaKnown RBP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 HMCESQ96FZ2 354 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 PHF12Q96QT6 1004 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 TRIB3Q96RU7 358 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 ACOX2Q99424 681 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 SEPHS2Q99611 448 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 C19orf43Q9BQ61 176 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 ADNPQ9H2P0 1102 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 NOL6Q9H6R4 1146 aaKnown RBP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 FAM118AQ9NWS6 357 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 WARS2Q9UGM6 360 aaKnown RBP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 EIF3LQ9Y262 564 aaKnown RBP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 NYNRINQ9P2P1 1898 aaKnown RBP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 DCHS1Q96JQ0 3298 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 C1orf232A0A0U1RR37 186 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 ISPDA4D126 451 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 ASPDHA6ND91 283 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 PRAMEF11O60813 436 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 WDR47O94967 919 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 GABARAPO95166 117 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 OTCP00480 354 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 MATN1P21941 496 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 SLC11A2P49281 568 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 TMED10P49755 219 aaKnown RBP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 ARHGDIAP52565 204 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 PLA2G16P53816 162 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 PTPN5P54829 565 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 RPS3AP61247 264 aaKnown RBP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 PPP2R2BQ00005 443 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 CSTF1Q05048 431 aaKnown RBP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 SLC10A7Q0GE19 358 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 KRR1Q13601 381 aaKnown RBP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 C5orf22Q49AR2 442 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 TIGD2Q4W5G0 525 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 C2orf27AQ580R0 203 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 EGFLAMQ63HQ2 1017 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 TUBA3EQ6PEY2 450 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 XKR5Q6UX68 686 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 TMEM92Q6UXU6 159 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 RPS27LQ71UM5 84 aaKnown RBP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 SYT13Q7L8C5 426 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 KDELC2Q7Z4H8 507 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 R3HCC1LQ7Z5L2 792 aaKnown RBP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 C14orf80Q86SX3 495 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 ADIPOR2Q86V24 386 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 GPSM1Q86YR5 675 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 ZC3H7AQ8IWR0 971 aaKnown RBP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 OR2T12Q8NG77 320 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 PROKR1Q8TCW9 393 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 CDKN2AIPNLQ96HQ2 116 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 NODALQ96S42 347 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 SEMA4BQ9NPR2 832 aaPredicted RBP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 FBXO8Q9NRD0 319 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 FAM86C1Q9NVL1 165 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 INTS6Q9UL03 887 aaKnown RBP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 TDRKHQ9Y2W6 561 aaKnown RBP12.53□□□□□ -0.4
HMGB2-205ENST00000511316 AP1M2Q9Y6Q5 423 aa12.53□□□□□ -0.4
HMGB2-205ENST00000511316 TBC1D3BA6NDS4 549 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 ZNF99A8MXY4 864 aaPredicted RBP12.52□□□□□ -0.41
HMGB2-205ENST00000511316 WASH3PC4AMC7 463 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 H3BMM5 538 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 SLC28A1O00337 649 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 GNGT2O14610 69 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 LAMTOR5O43504 91 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 ESR1P03372 595 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 TSPAN8P19075 237 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 NBL1P41271 181 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 ZFP36L2P47974 494 aaKnown RBP12.52□□□□□ -0.41
HMGB2-205ENST00000511316 DGKGP49619 791 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 FOXA1P55317 472 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 SEC13P55735 322 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 UFM1P61960 85 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 MRPS21P82921 87 aaKnown RBP12.52□□□□□ -0.41
HMGB2-205ENST00000511316 ENPP2Q13822 863 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 PLCL1Q15111 1095 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 MPPE1Q53F39 396 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 PAGE3Q5JUK9 113 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 OTUD3Q5T2D3 398 aaPredicted RBP12.52□□□□□ -0.41
HMGB2-205ENST00000511316 ATG9BQ674R7 924 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 SULT1C3Q6IMI6 304 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 FBXL22Q6P050 247 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 DLEU7Q6UYE1 221 aa12.52□□□□□ -0.41
HMGB2-205ENST00000511316 CFAP52Q8N1V2 620 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms