RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 OR2L3Q8NG85 312 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 OR2A1Q8NGT9 310 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 UBLCP1Q8WVY7 318 aaPredicted RBP13.46□□□□□ -0.25
CCM2-217ENST00000492883 KCNE4Q8WWG9 221 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 ZUFSPQ96AP4 578 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 MED8Q96G25 268 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 ATG10Q9H0Y0 220 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 FAM60AQ9NP50 221 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 SNX15Q9NRS6 342 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 TAC3Q9UHF0 121 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 SERTAD3Q9UJW9 196 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 ACOT9Q9Y305 439 aa13.46□□□□□ -0.25
CCM2-217ENST00000492883 COL27A1Q8IZC6 1860 aaPredicted RBP13.45□□□□□ -0.26
CCM2-217ENST00000492883 A0A087X1B8 175 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 HMX2A2RU54 273 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 STMND1H3BQB6 276 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 CCNDBP1O95273 360 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 WISP3O95389 354 aaPredicted RBP13.45□□□□□ -0.26
CCM2-217ENST00000492883 C2P06681 752 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 ANXA5P08758 320 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 SLC35E2BP0CK96 405 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 CD1DP15813 335 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 CNTFP26441 200 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 EIF2S3P41091 472 aaKnown RBP13.45□□□□□ -0.26
CCM2-217ENST00000492883 GRIA3P42263 894 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 SERPINB8P50452 374 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 ZIC1Q15915 447 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 TAF1BQ53T94 588 aaPredicted RBP13.45□□□□□ -0.26
CCM2-217ENST00000492883 SBSNQ6UWP8 590 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 CCDC91Q7Z6B0 441 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 ADAMTSL2Q86TH1 951 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 OR8K5Q8NH50 307 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 ATL1Q8WXF7 558 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 ZNF501Q96CX3 271 aaPredicted RBP13.45□□□□□ -0.26
CCM2-217ENST00000492883 RNF31Q96EP0 1072 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 EGFL8Q99944 293 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 ULBP3Q9BZM4 244 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 PCBD2Q9H0N5 130 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 NMRAL1Q9HBL8 299 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 MRPS30Q9NP92 439 aaKnown RBP13.45□□□□□ -0.26
CCM2-217ENST00000492883 CCDC177Q9NQR7 707 aaPredicted RBP13.45□□□□□ -0.26
CCM2-217ENST00000492883 ZNF180Q9UJW8 692 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 ACSL6Q9UKU0 697 aa13.45□□□□□ -0.26
CCM2-217ENST00000492883 A0A096LPK6 155 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 TARM1B6A8C7 271 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 TMEM150CB9EJG8 249 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 KLK10O43240 276 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 KRT37O76014 449 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 STK17BO94768 372 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 SNRPAP09012 282 aaKnown RBP13.44□□□□□ -0.26
CCM2-217ENST00000492883 LTA4HP09960 611 aaKnown RBP13.44□□□□□ -0.26
CCM2-217ENST00000492883 LIPCP11150 499 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 CCND1P24385 295 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 GMPRP36959 345 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 ABATP80404 500 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 PRDX1Q06830 199 aaKnown RBP13.44□□□□□ -0.26
CCM2-217ENST00000492883 NAA25Q14CX7 972 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.44□□□□□ -0.26
CCM2-217ENST00000492883 ICE2Q659A1 982 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 CAPN13Q6MZZ7 669 aaPredicted RBP13.44□□□□□ -0.26
CCM2-217ENST00000492883 PWWP2BQ6NUJ5 590 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 WDR93Q6P2C0 686 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 GPSM1Q86YR5 675 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 TMEM126BQ8IUX1 230 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 LRRC56Q8IYG6 542 aaPredicted RBP13.44□□□□□ -0.26
CCM2-217ENST00000492883 DCAKDQ8WVC6 231 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 FBXL8Q96CD0 374 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 UBXN10Q96LJ8 280 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 FCRL4Q96PJ5 515 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 DPH7Q9BTV6 452 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 DPH1Q9BZG8 443 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 CHRNA10Q9GZZ6 450 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 VPS11Q9H270 941 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 IRAK4Q9NWZ3 460 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 PLCL2Q9UPR0 1127 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 OARD1Q9Y530 152 aa13.44□□□□□ -0.26
CCM2-217ENST00000492883 NCOR2Q9Y618 2525 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 NCF1BA6NI72 391 aaPredicted RBP13.43□□□□□ -0.26
CCM2-217ENST00000492883 SRRM3A6NNA2 597 aaPredicted RBP13.43□□□□□ -0.26
CCM2-217ENST00000492883 NCF1CA8MVU1 366 aaPredicted RBP13.43□□□□□ -0.26
CCM2-217ENST00000492883 TRIM49D1C9J1S8 452 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 RAD1O60671 282 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 SCRG1O75711 98 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 KIAA0754O94854 1291 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 ALDOAP04075 364 aaKnown RBP13.43□□□□□ -0.26
CCM2-217ENST00000492883 NTRK1P04629 796 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 MSL3P1P0C860 447 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 NCF1P14598 390 aaPredicted RBP13.43□□□□□ -0.26
CCM2-217ENST00000492883 ZNF28P17035 718 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 SLC26A3P40879 764 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 TBPL1P62380 186 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 YBX1P67809 324 aaKnown RBP13.43□□□□□ -0.26
CCM2-217ENST00000492883 TGFBIQ15582 683 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 TGIF1Q15583 401 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 PPP1R3AQ16821 1122 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 DEFB110Q30KQ9 67 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 ZC3H12BQ5HYM0 836 aaKnown RBP13.43□□□□□ -0.26
CCM2-217ENST00000492883 PRAMEF13Q5VWM6 474 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 FCRL6Q6DN72 434 aa13.43□□□□□ -0.26
CCM2-217ENST00000492883 ADCK2Q7Z695 626 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms