RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 MAGEA3P43357 314 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 CSE1LP55060 971 aaKnown RBP8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 FOXL2P58012 376 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 CCZ1BP86790 482 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 CCZ1P86791 482 aaPredicted RBP8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 GRM7Q14831 915 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 ARHGAP19Q14CB8 494 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 SF1Q15637 639 aaKnown RBP8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 NKG7Q16617 165 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 PRTGQ2VWP7 1150 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 FAM214AQ32MH5 1076 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 RNF187Q5TA31 235 aaPredicted RBP8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 MLIPQ5VWP3 458 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 MRNIPQ6NTE8 343 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 NEPROQ6NW34 567 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 KIRREL2Q6UWL6 708 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 Q6ZS92 163 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 NEK10Q6ZWH5 1172 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 RNF44Q7L0R7 432 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 OTOAQ7RTW8 1153 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 SDCCAG8Q86SQ7 713 aaPredicted RBP8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 CILP2Q8IUL8 1156 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 GALNT16Q8N428 558 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 C2orf73Q8N5S3 287 aaPredicted RBP8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 CLEC1AQ8NC01 280 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 OR2L3Q8NG85 312 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 CFAP61Q8NHU2 1237 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 N4BP2L2Q92802 583 aaPredicted RBP8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 SLC7A5P2Q9GIP4 190 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 ATP13A2Q9NQ11 1180 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 LZTFL1Q9NQ48 299 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 CUTCQ9NTM9 273 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 CUEDC1Q9NWM3 386 aaPredicted RBP8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 SPATA7Q9P0W8 599 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 GALPQ9UBC7 116 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 GPN3Q9UHW5 284 aaPredicted RBP8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 SLC39A10Q9ULF5 831 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 G3BP2Q9UN86 482 aaKnown RBP8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 B3GNT3Q9Y2A9 372 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 NFS1Q9Y697 457 aa8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 DIDO1Q9BTC0 2240 aaKnown RBP8.02□□□□□ -1.13
SMARCB1-207ENST00000491967 ITPR2Q14571 2701 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 LOC105369274A0A096LPK9 316 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 IGKV1-8A0A0C4DH67 115 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 LOC102723532A0A0G2JNH3 316 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 ZCWPW2A0A1B0GU75 182 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 HYKKA2RU49 373 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 A6NL46 340 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 GOLGA6L6A8MZA4 724 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 GFYI3L273 518 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 PEX12O00623 359 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 PHF2O75151 1096 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 VPS4BO75351 444 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 AVILO75366 819 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 CBX6O95503 412 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 MCM3P25205 808 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 OTX2P32243 289 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 CLCN7P51798 805 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 EIF3BP55884 814 aaKnown RBP8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 YBX1P67809 324 aaKnown RBP8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 BASP1P80723 227 aaKnown RBP8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 AIMP2Q13155 320 aaKnown RBP8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 SLC9A5Q14940 896 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 NAA25Q14CX7 972 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 ANKRD20A4Q4UJ75 823 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 PRR30Q53SZ7 412 aaPredicted RBP8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 WASHC2DQ5SRD0 308 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 PRAMEF13Q5VWM6 474 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 ANKRD22Q5VYY1 191 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 ATG9BQ674R7 924 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 FRMPD2BQ6IN97 320 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 ZNF425Q6IV72 752 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 TTC27Q6P3X3 843 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 ZNF549Q6P9A3 640 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 TTC23LQ6PF05 361 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 CES3Q6UWW8 571 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 CYHR1Q6ZMK1 362 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 TTLL10Q6ZVT0 673 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 LRRC56Q8IYG6 542 aaPredicted RBP8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 OR4N4Q8N0Y3 316 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 AGGF1Q8N302 714 aaeCLIP8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 OR9A1PQ8NGU1 263 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 MAGEC3Q8TD91 643 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 ASB11Q8WXH4 323 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 INPP5DQ92835 1189 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 SNRNP40Q96DI7 357 aaKnown RBP8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 SELENOSQ9BQE4 189 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 SYNPO2LQ9H987 977 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 TXLNGQ9NUQ3 528 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 INTS10Q9NVR2 710 aaKnown RBP8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 NDOR1Q9UHB4 597 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 CIDEBQ9UHD4 219 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 NXT1Q9UKK6 140 aaKnown RBP8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 VPS4AQ9UN37 437 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 VPS9D1Q9Y2B5 631 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 PPP2R2CQ9Y2T4 447 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 HS3ST3B1Q9Y662 390 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 SCN2AQ99250 2005 aa8.01□□□□□ -1.13
SMARCB1-207ENST00000491967 TEX15Q9BXT5 2789 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms