RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 GUF1Q8N442 669 aaKnown RBP3.99□□□□□ -1.77
ITGB1-214ENST00000488427 TTC30BQ8N4P2 665 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 TSPAN14Q8NG11 270 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 TMEM143Q96AN5 459 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 ZNF524Q96C55 264 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 OR6C1Q96RD1 312 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 MYADMQ96S97 322 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 LMF2Q9BU23 707 aaKnown RBP3.99□□□□□ -1.77
ITGB1-214ENST00000488427 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.99□□□□□ -1.77
ITGB1-214ENST00000488427 DPP3Q9NY33 737 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.99□□□□□ -1.77
ITGB1-214ENST00000488427 MDFICQ9P1T7 246 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 CHORDC1Q9UHD1 332 aaPredicted RBP3.99□□□□□ -1.77
ITGB1-214ENST00000488427 RABGAP1Q9Y3P9 1069 aa3.99□□□□□ -1.77
ITGB1-214ENST00000488427 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.99□□□□□ -1.77
ITGB1-214ENST00000488427 A0A1W2PN81 502 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 SYNDIG1LA6NDD5 238 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 GLOD5A6NK44 160 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 DUXAA6NLW8 204 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 OR6C76A6NM76 312 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 RNASEH1O60930 286 aaKnown RBP3.98□□□□□ -1.77
ITGB1-214ENST00000488427 MED24O75448 989 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 WISP2O76076 250 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 CLPTM1O96005 669 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 PORP16435 677 aaPredicted RBP3.98□□□□□ -1.77
ITGB1-214ENST00000488427 CHRNA7P36544 502 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 EPS15P42566 896 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 LINC01547P58512 204 aaPredicted RBP3.98□□□□□ -1.77
ITGB1-214ENST00000488427 KRTAP24-1Q3LI83 254 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 KIAA1644Q3SXP7 199 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 MDH1BQ5I0G3 518 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 TDHQ8IZJ6 230 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 MINDY1Q8N5J2 469 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 CPSF7Q8N684 471 aaKnown RBP3.98□□□□□ -1.77
ITGB1-214ENST00000488427 ATL1Q8WXF7 558 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 ZNF622Q969S3 477 aaKnown RBP eCLIP3.98□□□□□ -1.77
ITGB1-214ENST00000488427 SLC47A1Q96FL8 570 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 ZNF582Q96NG8 517 aaPredicted RBP3.98□□□□□ -1.77
ITGB1-214ENST00000488427 MS4A10Q96PG2 267 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 ASCL2Q99929 193 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 SLC35C2Q9NQQ7 365 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 SPHK1Q9NYA1 384 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 IL17BQ9UHF5 180 aa3.98□□□□□ -1.77
ITGB1-214ENST00000488427 DDX25Q9UHL0 483 aaKnown RBP3.98□□□□□ -1.77
ITGB1-214ENST00000488427 CFAP47Q6ZTR5 3102 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 FAM186AA6NE01 2351 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 PRSS51A0A1B0GVH4 220 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 C5orf60A6NFR6 353 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 HHLA1C9JL84 531 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 TO15178 435 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 PRKRAO75569 313 aaKnown RBP3.97□□□□□ -1.77
ITGB1-214ENST00000488427 PIGNO95427 931 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 EML2O95834 649 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 PRSS56P0CW18 603 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 NNMTP40261 264 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 SUOXP51687 545 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 CRIP2P52943 208 aaPredicted RBP3.97□□□□□ -1.77
ITGB1-214ENST00000488427 ATP12AP54707 1039 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 ERVK11-1P61568 191 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 HERV-K104P61576 105 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 ITPK1Q13572 414 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 MRGPRG-AS1Q2M3A8 158 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 IGSF11Q5DX21 431 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 ARHGAP11AQ6P4F7 1023 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 ZNF449Q6P9G9 518 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 SH2D5Q6ZV89 423 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 KBTBD6Q86V97 674 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 TMEM173Q86WV6 379 aaPredicted RBP3.97□□□□□ -1.77
ITGB1-214ENST00000488427 KLHDC8BQ8IXV7 354 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 SYT2Q8N9I0 419 aaPredicted RBP3.97□□□□□ -1.77
ITGB1-214ENST00000488427 WDR20Q8TBZ3 569 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 PTPMT1Q8WUK0 201 aaPredicted RBP3.97□□□□□ -1.77
ITGB1-214ENST00000488427 LPGAT1Q92604 370 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 ZNF501Q96CX3 271 aaPredicted RBP3.97□□□□□ -1.77
ITGB1-214ENST00000488427 PAFAH2Q99487 392 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 SEPHS2Q99611 448 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 CDX2Q99626 313 aaPredicted RBP3.97□□□□□ -1.77
ITGB1-214ENST00000488427 PSD2Q9BQI7 771 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 RTP3Q9BQQ7 232 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 FSD1Q9BTV5 496 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 ABHD6Q9BV23 337 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 FNDC11Q9BVV2 318 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 MIS12Q9H081 205 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 SLA2Q9H6Q3 261 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 SLC52A3Q9NQ40 469 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 PTTG2Q9NZH5 202 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 NPAP1Q9NZP6 1156 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 MORF4L1Q9UBU8 362 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 OSGIN1Q9UJX0 560 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 PTRH2Q9Y3E5 179 aaKnown RBP3.97□□□□□ -1.77
ITGB1-214ENST00000488427 C5orf42Q9H799 3197 aa3.97□□□□□ -1.77
ITGB1-214ENST00000488427 GREB1LQ9C091 1923 aaPredicted RBP3.97□□□□□ -1.77
ITGB1-214ENST00000488427 RIF1Q5UIP0 2472 aaKnown RBP3.97□□□□□ -1.77
ITGB1-214ENST00000488427 ZNF609O15014 1411 aa3.96□□□□□ -1.77
ITGB1-214ENST00000488427 CDH23Q9H251 3354 aa3.96□□□□□ -1.78
ITGB1-214ENST00000488427 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.96□□□□□ -1.78
ITGB1-214ENST00000488427 GPR75-ASB3A0A0A6YYF3 556 aa3.96□□□□□ -1.78
ITGB1-214ENST00000488427 TEX13DA0A0J9YY54 714 aaPredicted RBP3.96□□□□□ -1.78
ITGB1-214ENST00000488427 ERVV-2B6SEH9 535 aa3.96□□□□□ -1.78
ITGB1-214ENST00000488427 SYNCRIPO60506 623 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms