RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 GSTM2P28161 218 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 GALK1P51570 392 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 BOP1Q14137 746 aaKnown RBP25.4■■□□□ 1.66
HLA-C-208ENST00000487245 TEAD2Q15562 447 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 ZC3H12BQ5HYM0 836 aaKnown RBP25.4■■□□□ 1.66
HLA-C-208ENST00000487245 KLHL35Q6PF15 583 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 ADIPOR2Q86V24 386 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 SELENOMQ8WWX9 145 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 TESCQ96BS2 214 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 TBC1D20Q96BZ9 403 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 NRBF2Q96F24 287 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 ITCHQ96J02 903 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 HHIPQ96QV1 700 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 TCF25Q9BQ70 676 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 ELOVL6Q9H5J4 265 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 C11orf49Q9H6J7 331 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 RMND5AQ9H871 391 aa25.4■■□□□ 1.66
HLA-C-208ENST00000487245 NFKBIL1Q9UBC1 381 aaPredicted RBP25.4■■□□□ 1.66
HLA-C-208ENST00000487245 QSOX1O00391 747 aa25.39■■□□□ 1.66
HLA-C-208ENST00000487245 WNT9AO14904 365 aa25.39■■□□□ 1.66
HLA-C-208ENST00000487245 RECQL5O94762 991 aaPredicted RBP25.39■■□□□ 1.66
HLA-C-208ENST00000487245 PDYNP01213 254 aa25.39■■□□□ 1.66
HLA-C-208ENST00000487245 POLR2EP19388 210 aaKnown RBP25.39■■□□□ 1.66
HLA-C-208ENST00000487245 ENTPD1P49961 510 aa25.39■■□□□ 1.66
HLA-C-208ENST00000487245 NEDD8Q15843 81 aa25.39■■□□□ 1.66
HLA-C-208ENST00000487245 CPSF6Q16630 551 aaKnown RBP eCLIP25.39■■□□□ 1.66
HLA-C-208ENST00000487245 XAF1Q6GPH4 301 aa25.39■■□□□ 1.66
HLA-C-208ENST00000487245 SKA2Q8WVK7 121 aaPredicted RBP25.39■■□□□ 1.66
HLA-C-208ENST00000487245 OTUB2Q96DC9 234 aa25.39■■□□□ 1.66
HLA-C-208ENST00000487245 TCEAL4Q96EI5 215 aa25.39■■□□□ 1.66
HLA-C-208ENST00000487245 CMTM7Q96FZ5 175 aa25.39■■□□□ 1.66
HLA-C-208ENST00000487245 PHF12Q96QT6 1004 aa25.39■■□□□ 1.66
HLA-C-208ENST00000487245 DCUN1D5Q9BTE7 237 aa25.39■■□□□ 1.66
HLA-C-208ENST00000487245 TMED5Q9Y3A6 229 aa25.39■■□□□ 1.66
HLA-C-208ENST00000487245 TSPAN11A1L157 253 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 FTH1P02794 183 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 NNMTP40261 264 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 PHC1P78364 1004 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 ZNF33BQ06732 778 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 IL18R1Q13478 541 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 OTOP2Q7RTS6 562 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 TMEM132CQ8N3T6 1108 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 THAP11Q96EK4 314 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 ABCG8Q9H221 673 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 FANCEQ9HB96 536 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 DNAJC11Q9NVH1 559 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 PCDHB14Q9Y5E9 798 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 MOSPD3O75425 235 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 S100A3P33764 101 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 HTRA3P83110 453 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 ABHD18Q0P651 414 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 KCNC3Q14003 757 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 RFX4Q33E94 735 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 C6orf141Q5SZD1 244 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 DET1Q7L5Y6 550 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 EID3Q8N140 333 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 CHDHQ8NE62 594 aaPredicted RBP25.38■■□□□ 1.65
HLA-C-208ENST00000487245 TBC1D15Q8TC07 691 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 FAM120BQ96EK7 910 aaKnown RBP25.38■■□□□ 1.65
HLA-C-208ENST00000487245 REXO5Q96IC2 774 aaKnown RBP25.38■■□□□ 1.65
HLA-C-208ENST00000487245 AMBRA1Q9C0C7 1298 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 SMURF2Q9HAU4 748 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 IL23AQ9NPF7 189 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 BLOC1S6Q9UL45 172 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 INSL6Q9Y581 213 aa25.38■■□□□ 1.65
HLA-C-208ENST00000487245 A0A1W2PPW3 197 aa25.37■■□□□ 1.65
HLA-C-208ENST00000487245 PTPN6P29350 595 aa25.37■■□□□ 1.65
HLA-C-208ENST00000487245 GTDC1Q4AE62 458 aa25.37■■□□□ 1.65
HLA-C-208ENST00000487245 TRAM1L1Q8N609 369 aa25.37■■□□□ 1.65
HLA-C-208ENST00000487245 BEND7Q8N7W2 519 aaPredicted RBP25.37■■□□□ 1.65
HLA-C-208ENST00000487245 MRPL43Q8N983 215 aaKnown RBP25.37■■□□□ 1.65
HLA-C-208ENST00000487245 HCAR2Q8TDS4 363 aa25.37■■□□□ 1.65
HLA-C-208ENST00000487245 ASZ1Q8WWH4 475 aa25.37■■□□□ 1.65
HLA-C-208ENST00000487245 TBCDQ9BTW9 1192 aa25.37■■□□□ 1.65
HLA-C-208ENST00000487245 GPN2Q9H9Y4 310 aaPredicted RBP25.37■■□□□ 1.65
HLA-C-208ENST00000487245 MARK1Q9P0L2 795 aa25.37■■□□□ 1.65
HLA-C-208ENST00000487245 MTCL1Q9Y4B5 1905 aaKnown RBP25.37■■□□□ 1.65
HLA-C-208ENST00000487245 DNAJB5O75953 348 aa25.36■■□□□ 1.65
HLA-C-208ENST00000487245 INHBBP09529 407 aa25.36■■□□□ 1.65
HLA-C-208ENST00000487245 EEF1B2P24534 225 aaKnown RBP25.36■■□□□ 1.65
HLA-C-208ENST00000487245 DCTP40126 519 aa25.36■■□□□ 1.65
HLA-C-208ENST00000487245 ZNF77Q15935 545 aa25.36■■□□□ 1.65
HLA-C-208ENST00000487245 PTCHD3Q3KNS1 767 aa25.36■■□□□ 1.65
HLA-C-208ENST00000487245 GCNT7Q6ZNI0 430 aa25.36■■□□□ 1.65
HLA-C-208ENST00000487245 CHST15Q7LFX5 561 aaPredicted RBP25.36■■□□□ 1.65
HLA-C-208ENST00000487245 R3HCC1LQ7Z5L2 792 aaKnown RBP25.36■■□□□ 1.65
HLA-C-208ENST00000487245 HIPK1Q86Z02 1210 aa25.36■■□□□ 1.65
HLA-C-208ENST00000487245 RAB2BQ8WUD1 216 aa25.36■■□□□ 1.65
HLA-C-208ENST00000487245 SNX19Q92543 992 aa25.36■■□□□ 1.65
HLA-C-208ENST00000487245 FBXL8Q96CD0 374 aa25.36■■□□□ 1.65
HLA-C-208ENST00000487245 MTFMTQ96DP5 389 aaKnown RBP25.36■■□□□ 1.65
HLA-C-208ENST00000487245 NAA50Q9GZZ1 169 aaKnown RBP25.36■■□□□ 1.65
HLA-C-208ENST00000487245 SLC6A13Q9NSD5 602 aa25.36■■□□□ 1.65
HLA-C-208ENST00000487245 CD84Q9UIB8 345 aa25.36■■□□□ 1.65
HLA-C-208ENST00000487245 C3orf18Q9UK00 162 aa25.36■■□□□ 1.65
HLA-C-208ENST00000487245 DLGAP4Q9Y2H0 992 aa25.36■■□□□ 1.65
HLA-C-208ENST00000487245 PCDHGA8Q9Y5G5 932 aa25.36■■□□□ 1.65
HLA-C-208ENST00000487245 ZBBXA8MT70 800 aa25.36■■□□□ 1.65
HLA-C-208ENST00000487245 UPK3BL1B0FP48 263 aa25.36■■□□□ 1.65
HLA-C-208ENST00000487245 UPK3BL2E5RIL1 263 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms