RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 NAT8LQ8N9F0 302 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 MCUQ8NE86 351 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 ACTRT1Q8TDG2 376 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 GRK7Q8WTQ7 553 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 DLG3Q92796 817 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 CAPZA3Q96KX2 299 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 TCF12Q99081 682 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 NDNQ99608 321 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 DHRS4Q9BTZ2 278 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 CHRNA10Q9GZZ6 450 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 CCDC68Q9H2F9 335 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 SLC6A20Q9NP91 592 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 SLC22A11Q9NSA0 550 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 CUTCQ9NTM9 273 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 INTS10Q9NVR2 710 aaKnown RBP10.04□□□□□ -0.8
CPSF4-212ENST00000482251 SPATA7Q9P0W8 599 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 SLC17A6Q9P2U8 582 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 CTSFQ9UBX1 484 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 TAC3Q9UHF0 121 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 MAU2Q9Y6X3 613 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 FAM169AQ9Y6X4 670 aa10.04□□□□□ -0.8
CPSF4-212ENST00000482251 LOC105369274A0A096LPK9 316 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 LOC102723532A0A0G2JNH3 316 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 TTLL8A6PVC2 850 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 ZSCAN12O43309 604 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 PRICKLE3O43900 615 aaPredicted RBP10.03□□□□□ -0.8
CPSF4-212ENST00000482251 MED26O95402 600 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 MATN4O95460 622 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 CATP04040 527 aaKnown RBP10.03□□□□□ -0.8
CPSF4-212ENST00000482251 UMODP07911 640 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 ATP5DP30049 168 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 RPA3P35244 121 aaPredicted RBP10.03□□□□□ -0.8
CPSF4-212ENST00000482251 GCGRP47871 477 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 OR1D4P47884 311 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 RRADP55042 308 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 ADARP55265 1226 aaKnown RBP10.03□□□□□ -0.8
CPSF4-212ENST00000482251 PRR30Q53SZ7 412 aaPredicted RBP10.03□□□□□ -0.8
CPSF4-212ENST00000482251 HSP90AA5PQ58FG0 334 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 ZC3H12BQ5HYM0 836 aaKnown RBP10.03□□□□□ -0.8
CPSF4-212ENST00000482251 HP1BP3Q5SSJ5 553 aaPredicted RBP10.03□□□□□ -0.8
CPSF4-212ENST00000482251 RNASEH2BQ5TBB1 312 aaKnown RBP10.03□□□□□ -0.8
CPSF4-212ENST00000482251 MRPL14Q6P1L8 145 aaKnown RBP10.03□□□□□ -0.8
CPSF4-212ENST00000482251 COX15Q7KZN9 410 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 PIWIL4Q7Z3Z4 852 aaKnown RBP10.03□□□□□ -0.8
CPSF4-212ENST00000482251 PPP1R32Q7Z5V6 425 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 KCNMB4Q86W47 210 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 PPIL6Q8IXY8 311 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 CPNE9Q8IYJ1 553 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 PRSS58Q8IYP2 241 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 OR4N4Q8N0Y3 316 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 TMEM102Q8N9M5 508 aaPredicted RBP10.03□□□□□ -0.8
CPSF4-212ENST00000482251 TTC29Q8NA56 475 aaPredicted RBP10.03□□□□□ -0.8
CPSF4-212ENST00000482251 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.03□□□□□ -0.8
CPSF4-212ENST00000482251 OR2A1Q8NGT9 310 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 OR9A1PQ8NGU1 263 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 OR2Y1Q8NGV0 311 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 MAGEC3Q8TD91 643 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 COL26A1Q96A83 441 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 PKP4Q99569 1192 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 GPR21Q99679 349 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 C17orf62Q9BQA9 187 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 DPH7Q9BTV6 452 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 SOX17Q9H6I2 414 aaPredicted RBP10.03□□□□□ -0.8
CPSF4-212ENST00000482251 SYNPO2LQ9H987 977 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 IARS2Q9NSE4 1012 aaKnown RBP10.03□□□□□ -0.8
CPSF4-212ENST00000482251 GPR83Q9NYM4 423 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 MAP10Q9P2G4 905 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 VPS9D1Q9Y2B5 631 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 MED16Q9Y2X0 877 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 PCDHGA9Q9Y5G4 932 aaKnown RBP10.03□□□□□ -0.8
CPSF4-212ENST00000482251 MRFAP1Q9Y605 127 aa10.03□□□□□ -0.8
CPSF4-212ENST00000482251 UBR5O95071 2799 aaPredicted RBP10.02□□□□□ -0.81
CPSF4-212ENST00000482251 MYO1CO00159 1063 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 PEX12O00623 359 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 FFAR3O14843 346 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 DSCR3O14972 297 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 GPR42O15529 346 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 PSIP1O75475 530 aaKnown RBP10.02□□□□□ -0.81
CPSF4-212ENST00000482251 HAUS5O94927 633 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 SLC16A8O95907 504 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 STATHP02808 62 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 ERVK-10P10266 1014 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 PGAM1P18669 254 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 CMPK1P30085 196 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 UQCRFS1P47985 274 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 ARSFP54793 590 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 DHX9Q08211 1270 aaKnown RBP10.02□□□□□ -0.81
CPSF4-212ENST00000482251 PTK6Q13882 451 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 GRM7Q14831 915 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 CRYMQ14894 314 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 CYP2A13Q16696 494 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 TTLL9Q3SXZ7 439 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 MSS51Q4VC12 460 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 WASHC2DQ5SRD0 308 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 MED25Q71SY5 747 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 RNF44Q7L0R7 432 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 ADCK2Q7Z695 626 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 KLHL7Q8IXQ5 586 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 HMGCLL1Q8TB92 370 aa10.02□□□□□ -0.81
CPSF4-212ENST00000482251 CD200R1Q8TD46 325 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms