RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 MVB12BQ9H7P6 319 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 WASH6PQ9NQA3 447 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 TRNAU1APQ9NX07 287 aaKnown RBP9.09□□□□□ -0.95
VPS52-216ENST00000471309 NDE1Q9NXR1 346 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 PCOLCE2Q9UKZ9 415 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 DYRK1BQ9Y463 629 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 GPR45Q9Y5Y3 372 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 DGKBQ9Y6T7 804 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 SPTBN5Q9NRC6 3674 aaKnown RBP9.09□□□□□ -0.95
VPS52-216ENST00000471309 ANKRD12Q6UB98 2062 aa9.09□□□□□ -0.95
VPS52-216ENST00000471309 NUMA1Q14980 2115 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 LOC100653049A0A140TA62 436 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 BBIP1A8MTZ0 92 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 PDZK1P1A8MUH7 402 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 KDM1AO60341 852 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 RASSF9O75901 435 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 KRT34O76011 436 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 RSL1D1O76021 490 aaKnown RBP9.08□□□□□ -0.96
VPS52-216ENST00000471309 PDYNP01213 254 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 MTHFD1P11586 935 aaKnown RBP9.08□□□□□ -0.96
VPS52-216ENST00000471309 ACPPP15309 386 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 NPPBP16860 134 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 CD22P20273 847 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 PKLRP30613 574 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 DIO3P55073 304 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 SRP54P61011 504 aaKnown RBP9.08□□□□□ -0.96
VPS52-216ENST00000471309 MTAPQ13126 283 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 STX5Q13190 355 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 DOC2AQ14183 400 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 CLCA4Q14CN2 919 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 IMPG1Q17R60 797 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 ATG9BQ674R7 924 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 DUS1LQ6P1R4 473 aaKnown RBP9.08□□□□□ -0.96
VPS52-216ENST00000471309 LCTLQ6UWM7 567 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 ABRAXAS1Q6UWZ7 409 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 SLCO4C1Q6ZQN7 724 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 GK5Q6ZS86 529 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 TMPRSS11BQ86T26 416 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 LONP2Q86WA8 852 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 ZFAND4Q86XD8 727 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 PARP9Q8IXQ6 854 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 FAM160A2Q8N612 972 aaPredicted RBP9.08□□□□□ -0.96
VPS52-216ENST00000471309 FNDC5Q8NAU1 212 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 CADM4Q8NFZ8 388 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 WDR20Q8TBZ3 569 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 TSPEARQ8WU66 669 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 SLC5A11Q8WWX8 675 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 SELENOMQ8WWX9 145 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 SMPDL3AQ92484 453 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 NEIL2Q969S2 332 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 MCUR1Q96AQ8 359 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 REPS1Q96D71 796 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 IL17FQ96PD4 163 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 HBEGFQ99075 208 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 HAUS8Q9BT25 410 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 EFCAB11Q9BUY7 163 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 ACPTQ9BZG2 426 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 PCBD2Q9H0N5 130 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 SLC40A1Q9NP59 571 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 FARSBQ9NSD9 589 aaKnown RBP9.08□□□□□ -0.96
VPS52-216ENST00000471309 IMP3Q9NV31 184 aaKnown RBP9.08□□□□□ -0.96
VPS52-216ENST00000471309 NOP53Q9NZM5 478 aaKnown RBP9.08□□□□□ -0.96
VPS52-216ENST00000471309 ZIM2Q9NZV7 527 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 CCDC167Q9P0B6 97 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 PLAGL1Q9UM63 463 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 TDRKHQ9Y2W6 561 aaKnown RBP9.08□□□□□ -0.96
VPS52-216ENST00000471309 PLEKHM1Q9Y4G2 1056 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 HEBP2Q9Y5Z4 205 aa9.08□□□□□ -0.96
VPS52-216ENST00000471309 CFAP20Q9Y6A4 193 aaKnown RBP9.08□□□□□ -0.96
VPS52-216ENST00000471309 SPTY2D1-AS1A0A0U1RR47 76 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 A6NCN8 305 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 METTL12A8MUP2 240 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 NDUFS2O75306 463 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 RASGRP1O95267 797 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 SNRPB2P08579 225 aaKnown RBP9.07□□□□□ -0.96
VPS52-216ENST00000471309 THEGLP0DJG4 465 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 C1GALT1C1LP0DN25 315 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 HSD3B1P14060 373 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 CD1EP15812 388 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 PCSK2P16519 638 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 ITGAXP20702 1163 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 HSD3B2P26439 372 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 CD27P26842 260 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 NDUFS1P28331 727 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 NUDT2P50583 147 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 RAB28P51157 221 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 RPL38P63173 70 aaKnown RBP9.07□□□□□ -0.96
VPS52-216ENST00000471309 ELF3P78545 371 aaPredicted RBP9.07□□□□□ -0.96
VPS52-216ENST00000471309 ILF3Q12906 894 aaKnown RBP eCLIP9.07□□□□□ -0.96
VPS52-216ENST00000471309 PRKG2Q13237 762 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 LAPTM5Q13571 262 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 RCAN2Q14206 197 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 RPS6KA2Q15349 733 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 RPE65Q16518 533 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 AP5B1Q2VPB7 878 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 AGKQ53H12 422 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 SGO1Q5FBB7 561 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 COQ5Q5HYK3 327 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 PAGE2BQ5JRK9 111 aa9.07□□□□□ -0.96
VPS52-216ENST00000471309 MED27Q6P2C8 311 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms