RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 CPNE7Q9UBL6 633 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 CDYLQ9Y232 598 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 PCYT1BQ9Y5K3 369 aaPredicted RBP4.72□□□□□ -1.65
SDCBP-205ENST00000447267 NOTCH3Q9UM47 2321 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 ANKRD36A6QL64 1941 aa4.72□□□□□ -1.65
SDCBP-205ENST00000447267 RBMY1BA6NDE4 496 aaKnown RBP4.71□□□□□ -1.66
SDCBP-205ENST00000447267 RBMY1EA6NEQ0 496 aaKnown RBP4.71□□□□□ -1.66
SDCBP-205ENST00000447267 USP27XA6NNY8 438 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 A8MX80 341 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 CPLX1O14810 134 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 PIN1P1O15428 100 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 ADCY5O95622 1261 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 JCHAINP01591 159 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 IGHDP01880 384 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 RBMY1DP0C7P1 496 aaKnown RBP4.71□□□□□ -1.66
SDCBP-205ENST00000447267 MYCLP1P12525 358 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-205ENST00000447267 PEPDP12955 493 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 GM2AP17900 193 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 RPS6KB1P23443 525 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 NR0B1P51843 470 aaKnown RBP4.71□□□□□ -1.66
SDCBP-205ENST00000447267 ATP5J2P56134 94 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 CD69Q07108 199 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 ADIGQ0VDE8 80 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 KRT32Q14532 448 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 IL17AQ16552 155 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 ACKR1Q16570 336 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 TDRD12Q587J7 1177 aaKnown RBP4.71□□□□□ -1.66
SDCBP-205ENST00000447267 ZNF766Q5HY98 468 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 RABL3Q5HYI8 236 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 ZNF667Q5HYK9 610 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 C11orf87Q6NUJ2 197 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 MSANTD2Q6P1R3 559 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 CYB5D1Q6P9G0 228 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 GDPD4Q6W3E5 623 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 LEKR1Q6ZMV7 388 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 GPBP1Q86WP2 473 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 ZNF575Q86XF7 245 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 PHYKPLQ8IUZ5 450 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 LYSMD2Q8IV50 215 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 VRK3Q8IV63 474 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 DIS3L2Q8IYB7 885 aaKnown RBP4.71□□□□□ -1.66
SDCBP-205ENST00000447267 GPD1LQ8N335 351 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 GUF1Q8N442 669 aaKnown RBP4.71□□□□□ -1.66
SDCBP-205ENST00000447267 AMER3Q8N944 861 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 ANKRD20A12PQ8NF67 263 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 OR1L3Q8NH93 324 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 SUN3Q8TAQ9 357 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 BRIX1Q8TDN6 353 aaKnown RBP4.71□□□□□ -1.66
SDCBP-205ENST00000447267 TRIM44Q96DX7 344 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-205ENST00000447267 ZDHHC12Q96GR4 267 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 SLC39A13Q96H72 371 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 RPRD1AQ96P16 312 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-205ENST00000447267 OR2M4Q96R27 311 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 PPP1R9BQ96SB3 815 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 PRMT1Q99873 361 aaKnown RBP4.71□□□□□ -1.66
SDCBP-205ENST00000447267 ATG10Q9H0Y0 220 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 STN1Q9H668 368 aaKnown RBP4.71□□□□□ -1.66
SDCBP-205ENST00000447267 PCDH12Q9NPG4 1184 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 TMEM160Q9NX00 188 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 TBC1D7Q9P0N9 293 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 CDC23Q9UJX2 597 aa4.71□□□□□ -1.66
SDCBP-205ENST00000447267 MRPS2Q9Y399 296 aaKnown RBP4.71□□□□□ -1.66
SDCBP-205ENST00000447267 LILRA5A6NI73 299 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 TTI1O43156 1089 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 CDC45O75419 566 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 CTDNEP1O95476 244 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 MLYCDO95822 493 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 RHOCP08134 193 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 CELA2AP08217 269 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 XBP1P17861 261 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 HK1P19367 917 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 AGXTP21549 392 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 XPAP23025 273 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-205ENST00000447267 IGFBP5P24593 272 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 ATICP31939 592 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 STK3Q13188 491 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 ORC2Q13416 577 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-205ENST00000447267 PEX6Q13608 980 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 ZNF699Q32M78 642 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 TMEM119Q4V9L6 283 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 AWAT1Q58HT5 328 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 FAM120AOSQ5T036 256 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 KRT79Q5XKE5 535 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 SPOPLQ6IQ16 392 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 HIBCHQ6NVY1 386 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-205ENST00000447267 SHISA6Q6ZSJ9 500 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 TMEM26Q6ZUK4 368 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 ZNF720Q7Z2F6 126 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 EGFL6Q8IUX8 553 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 GSPT2Q8IYD1 628 aaKnown RBP4.7□□□□□ -1.66
SDCBP-205ENST00000447267 RFLNBQ8N5W9 214 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 PCDH20Q8N6Y1 951 aaKnown RBP4.7□□□□□ -1.66
SDCBP-205ENST00000447267 OR5M3Q8NGP4 307 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 GPR150Q8NGU9 434 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 DQX1Q8TE96 717 aaKnown RBP4.7□□□□□ -1.66
SDCBP-205ENST00000447267 CLEC4CQ8WTT0 213 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 SREK1Q8WXA9 508 aaKnown RBP4.7□□□□□ -1.66
SDCBP-205ENST00000447267 UBXN4Q92575 508 aa4.7□□□□□ -1.66
SDCBP-205ENST00000447267 SYAP1Q96A49 352 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-205ENST00000447267 PPM1MQ96MI6 270 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms